Mirjeta Pasha, Silvia Gazzola, Connor Sanderford, Ugochukwu O. Ugwu
{"title":"TRIPs-Py: Techniques for regularization of inverse problems in python","authors":"Mirjeta Pasha, Silvia Gazzola, Connor Sanderford, Ugochukwu O. Ugwu","doi":"10.1007/s11075-024-01878-w","DOIUrl":null,"url":null,"abstract":"<p>In this paper we describe TRIPs-Py, a new Python package of linear discrete inverse problems solvers and test problems. The goal of the package is two-fold: 1) to provide tools for solving small and large-scale inverse problems, and 2) to introduce test problems arising from a wide range of applications. The solvers available in TRIPs-Py include direct regularization methods (such as truncated singular value decomposition and Tikhonov) and iterative regularization techniques (such as Krylov subspace methods and recent solvers for <span>\\(\\ell _p\\)</span>-<span>\\(\\ell _q\\)</span> formulations, which enforce sparse or edge-preserving solutions and handle different noise types). All our solvers have built-in strategies to define the regularization parameter(s). Some of the test problems in TRIPs-Py arise from simulated image deblurring and computerized tomography, while other test problems model real problems in dynamic computerized tomography. Numerical examples are included to illustrate the usage as well as the performance of the described methods on the provided test problems. To the best of our knowledge, TRIPs-Py is the first Python software package of this kind, which may serve both research and didactical purposes.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2024-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1007/s11075-024-01878-w","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
In this paper we describe TRIPs-Py, a new Python package of linear discrete inverse problems solvers and test problems. The goal of the package is two-fold: 1) to provide tools for solving small and large-scale inverse problems, and 2) to introduce test problems arising from a wide range of applications. The solvers available in TRIPs-Py include direct regularization methods (such as truncated singular value decomposition and Tikhonov) and iterative regularization techniques (such as Krylov subspace methods and recent solvers for \(\ell _p\)-\(\ell _q\) formulations, which enforce sparse or edge-preserving solutions and handle different noise types). All our solvers have built-in strategies to define the regularization parameter(s). Some of the test problems in TRIPs-Py arise from simulated image deblurring and computerized tomography, while other test problems model real problems in dynamic computerized tomography. Numerical examples are included to illustrate the usage as well as the performance of the described methods on the provided test problems. To the best of our knowledge, TRIPs-Py is the first Python software package of this kind, which may serve both research and didactical purposes.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.