{"title":"Dissipation at limited resolutions: Power law and detection of hidden dissipative scales","authors":"Qiwei Yu, Pedro E. Harunari","doi":"arxiv-2407.13707","DOIUrl":null,"url":null,"abstract":"Nonequilibrium systems, in particular living organisms, are maintained by\nirreversible transformations of energy that drive diverse functions.\nQuantifying their irreversibility, as measured by energy dissipation, is\nessential for understanding the underlying mechanisms. However, existing\ntechniques usually overlook experimental limitations, either by assuming full\ninformation or by employing a coarse-graining method that requires knowledge of\nthe structure behind hidden degrees of freedom. Here, we study the inference of\ndissipation from finite-resolution measurements by employing a recently\ndeveloped model-free estimator that considers both the sequence of\ncoarse-grained transitions and the waiting time distributions:\n$\\sigma_2=\\sigma_2^\\ell + \\sigma_2^t$. The dominant term $\\sigma_2^\\ell$\noriginates from the sequence of observed transitions; we find that it scales\nwith resolution following a power law. Comparing the scaling exponent with a\nprevious estimator highlights the importance of accounting for flux\ncorrelations at lower resolutions. $\\sigma_2^t$ comes from asymmetries in\nwaiting time distributions, with its peak revealing characteristic scales of\nthe underlying dissipative process. Alternatively, the characteristic scale can\nbe detected in a crossover of the scaling of $\\sigma_2^\\ell$. This provides a\nnovel perspective for extracting otherwise hidden characteristic dissipative\nscales directly from dissipation measurements. We illustrate these results in\nbiochemical models as well as complex networks. Overall, this study highlights\nthe significance of resolution considerations in nonequilibrium systems,\nproviding insights into the interplay between experimental resolution, entropy\nproduction, and underlying complexity.","PeriodicalId":501040,"journal":{"name":"arXiv - PHYS - Biological Physics","volume":"25 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - PHYS - Biological Physics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2407.13707","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Nonequilibrium systems, in particular living organisms, are maintained by
irreversible transformations of energy that drive diverse functions.
Quantifying their irreversibility, as measured by energy dissipation, is
essential for understanding the underlying mechanisms. However, existing
techniques usually overlook experimental limitations, either by assuming full
information or by employing a coarse-graining method that requires knowledge of
the structure behind hidden degrees of freedom. Here, we study the inference of
dissipation from finite-resolution measurements by employing a recently
developed model-free estimator that considers both the sequence of
coarse-grained transitions and the waiting time distributions:
$\sigma_2=\sigma_2^\ell + \sigma_2^t$. The dominant term $\sigma_2^\ell$
originates from the sequence of observed transitions; we find that it scales
with resolution following a power law. Comparing the scaling exponent with a
previous estimator highlights the importance of accounting for flux
correlations at lower resolutions. $\sigma_2^t$ comes from asymmetries in
waiting time distributions, with its peak revealing characteristic scales of
the underlying dissipative process. Alternatively, the characteristic scale can
be detected in a crossover of the scaling of $\sigma_2^\ell$. This provides a
novel perspective for extracting otherwise hidden characteristic dissipative
scales directly from dissipation measurements. We illustrate these results in
biochemical models as well as complex networks. Overall, this study highlights
the significance of resolution considerations in nonequilibrium systems,
providing insights into the interplay between experimental resolution, entropy
production, and underlying complexity.