A series of quinazolin-4(3H)-one-morpholine hybrids as anti-lung-cancer agents: Synthesis, molecular docking, molecular dynamics, ADME prediction and biological activity studies

IF 3.3 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Chemical Biology & Drug Design Pub Date : 2024-07-22 DOI:10.1111/cbdd.14599
Feyzi Sinan Tokalı, Halil Şenol, Şeyma Ateşoğlu, Fahri Akbaş
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Abstract

In this study, we synthesized 15 novel quinazoline-morpholinobenzylideneamino hybrid compounds from methyl anthranilate and we assessed their cytotoxicity via in vitro assays against A549 and BEAS-2B cell lines. Molecular docking studies were conducted to evaluate the protein-ligand interactions and inhibition mechanisms on nine different molecular targets, while molecular dynamics (MD) simulations were carried out to assess the stability of the best docked ligand–protein complexes. Additionally, ADME prediction was carried out to determine physicochemical parameters and drug likeness. According to the cytotoxicity assays, compound 1 (IC50 = 2.83 μM) was found to be the most active inhibitor against A549 cells. While the selectivity index (SI) of compound 1 is 29, the SI of the reference drugs paclitaxel and sorafenib, used in this study, are 2.40 and 4.92, respectively. Among the hybrid compounds, 1 has the best docking scores against VEGFR1 (−11.744 kcal/mol), VEGFR2 (−12.407 kcal/mol) and EGFR (−10.359 kcal/mol). During MD simulations, compound 1 consistently exhibited strong hydrogen bond interactions with the active sites of VEGFR1 and 2, and these interactions were maintained for more than 90% of the simulation time. Additionally, the RMSD and RMSF values of the ligand–protein complexes exhibited high stability at their minimum levels around 1–2 Å. In conclusion, these findings suggest that compound 1 may be a potent and selective inhibitor candidate for lung cancer treatment and inhibition of VEGFR2, especially.

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作为抗肺癌药物的一系列喹唑啉-4(3H)-酮-吗啉混合物:合成、分子对接、分子动力学、ADME 预测和生物活性研究。
在这项研究中,我们以蒽酸甲酯为原料合成了 15 种新型喹唑啉-吗啉亚苄胺杂化物,并通过体外实验评估了它们对 A549 和 BEAS-2B 细胞系的细胞毒性。我们进行了分子对接研究,以评估蛋白质与配体之间的相互作用以及对九种不同分子靶点的抑制机制;同时还进行了分子动力学(MD)模拟,以评估最佳对接配体-蛋白质复合物的稳定性。此外,还进行了 ADME 预测,以确定理化参数和药物相似性。细胞毒性实验结果表明,化合物 1(IC50 = 2.83 μM)是对 A549 细胞最有效的抑制剂。化合物 1 的选择性指数(SI)为 29,而本研究中使用的参考药物紫杉醇和索拉非尼的选择性指数分别为 2.40 和 4.92。在混合化合物中,化合物 1 与血管内皮生长因子受体 1(VEGFR1)(-11.744 千卡/摩尔)、血管内皮生长因子受体 2(VEGFR2)(-12.407 千卡/摩尔)和表皮生长因子受体(EGFR)(-10.359 千卡/摩尔)的对接得分最高。在 MD 模拟过程中,化合物 1 与 VEGFR1 和 2 的活性位点始终保持着很强的氢键相互作用,而且这些相互作用保持了 90% 以上的模拟时间。此外,配体-蛋白质复合物的 RMSD 值和 RMSF 值在 1-2 Å 左右的最低水平上表现出很高的稳定性。总之,这些研究结果表明,化合物 1 可能是一种有效且具有选择性的候选抑制剂,可用于治疗肺癌,尤其是抑制血管内皮生长因子受体 2(VEGFR2)。
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来源期刊
Chemical Biology & Drug Design
Chemical Biology & Drug Design 医学-生化与分子生物学
CiteScore
5.10
自引率
3.30%
发文量
164
审稿时长
4.4 months
期刊介绍: Chemical Biology & Drug Design is a peer-reviewed scientific journal that is dedicated to the advancement of innovative science, technology and medicine with a focus on the multidisciplinary fields of chemical biology and drug design. It is the aim of Chemical Biology & Drug Design to capture significant research and drug discovery that highlights new concepts, insight and new findings within the scope of chemical biology and drug design.
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