Sporothrix brasiliensis-specific polymerase chain reaction for the diagnosis of cat and human sporotrichosis through non-invasive samples.

IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Medical mycology Pub Date : 2024-08-02 DOI:10.1093/mmy/myae075
Mariana Rodrigues Trápaga, Vanice Rodrigues Poester, Karine Ortiz Sanchotene, Rossana Patrícia Basso, Fabiana Fedatto Bernardon, Rejane Luvielmo, Cecília Bittencourt Severo, Rodrigo Almeida-Paes, Rosely Maria Zancopé Oliveira, Andrea von Groll, Melissa Orzechowski Xavier
{"title":"Sporothrix brasiliensis-specific polymerase chain reaction for the diagnosis of cat and human sporotrichosis through non-invasive samples.","authors":"Mariana Rodrigues Trápaga, Vanice Rodrigues Poester, Karine Ortiz Sanchotene, Rossana Patrícia Basso, Fabiana Fedatto Bernardon, Rejane Luvielmo, Cecília Bittencourt Severo, Rodrigo Almeida-Paes, Rosely Maria Zancopé Oliveira, Andrea von Groll, Melissa Orzechowski Xavier","doi":"10.1093/mmy/myae075","DOIUrl":null,"url":null,"abstract":"<p><p>Zoonotic sporotrichosis caused by Sporothrix brasiliensis is an emerging mycosis in Latin America. One of the problems to quickly treat infected animals and break the transmission chain is associated with the time-consuming gold-standard diagnosis method (culture). We aimed to evaluate a species-specific polymerase chain reaction (PCR) for the diagnosis of sporotrichosis caused by S. brasiliensis using non-invasive samples. We performed a retrospective cross-sectional study using samples collected with swabs from humans and cats with clinical suspicion of sporotrichosis. Deoxyribonucleic acid (DNA) was extracted using a commercial kit, and a species-specific PCR for S. brasiliensis detection was performed. One hundred ten samples were included. PCR showed a good concordance with culture (86% of agreement) for human and cat samples (Kappa coefficient = 0.722, and 0.727, respectively). In conclusion, our data shows that this adapted PCR using non-invasive samples can be applied to sporotrichosis diagnosis, being a good alternative mainly in regions with a lack of mycologists to identify the fungus in culture, contributing to the control of this emergent zoonosis.</p>","PeriodicalId":18586,"journal":{"name":"Medical mycology","volume":" ","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2024-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Medical mycology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1093/mmy/myae075","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0

Abstract

Zoonotic sporotrichosis caused by Sporothrix brasiliensis is an emerging mycosis in Latin America. One of the problems to quickly treat infected animals and break the transmission chain is associated with the time-consuming gold-standard diagnosis method (culture). We aimed to evaluate a species-specific polymerase chain reaction (PCR) for the diagnosis of sporotrichosis caused by S. brasiliensis using non-invasive samples. We performed a retrospective cross-sectional study using samples collected with swabs from humans and cats with clinical suspicion of sporotrichosis. Deoxyribonucleic acid (DNA) was extracted using a commercial kit, and a species-specific PCR for S. brasiliensis detection was performed. One hundred ten samples were included. PCR showed a good concordance with culture (86% of agreement) for human and cat samples (Kappa coefficient = 0.722, and 0.727, respectively). In conclusion, our data shows that this adapted PCR using non-invasive samples can be applied to sporotrichosis diagnosis, being a good alternative mainly in regions with a lack of mycologists to identify the fungus in culture, contributing to the control of this emergent zoonosis.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
通过非侵入性样本诊断猫和人孢子丝菌病的巴西孢子丝菌特异性 PCR。
由巴西孢子丝菌(Sporothrix brasiliensis)引起的人畜共患孢子丝菌病是拉丁美洲一种新出现的真菌病。快速治疗受感染动物并切断传播链的问题之一与耗时的黄金标准诊断方法(培养)有关。我们的目的是评估一种物种特异性聚合酶链反应(PCR),利用非侵入性样本诊断由巴西蝇孢子菌引起的蝇孢子菌病。我们使用从临床怀疑患有孢子丝菌病的人和猫身上采集的拭子样本进行了一项回顾性横断面研究。我们使用商业试剂盒提取了 DNA,并进行了用于检测巴西孢子虫的物种特异性 PCR 检测。其中包括 110 个样本。在人和猫的样本中,PCR 与培养结果显示出良好的一致性(86% 的一致性)(Kappa 系数分别为 0.722 和 0.727)。总之,我们的数据表明,这种采用非侵入性样本的 PCR 技术可用于孢子丝菌的诊断,在缺乏真菌学专家的地区是一种很好的替代方法,有助于控制这种新出现的人畜共患病。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Medical mycology
Medical mycology 医学-兽医学
CiteScore
5.70
自引率
3.40%
发文量
632
审稿时长
12 months
期刊介绍: Medical Mycology is a peer-reviewed international journal that focuses on original and innovative basic and applied studies, as well as learned reviews on all aspects of medical, veterinary and environmental mycology as related to disease. The objective is to present the highest quality scientific reports from throughout the world on divergent topics. These topics include the phylogeny of fungal pathogens, epidemiology and public health mycology themes, new approaches in the diagnosis and treatment of mycoses including clinical trials and guidelines, pharmacology and antifungal susceptibilities, changes in taxonomy, description of new or unusual fungi associated with human or animal disease, immunology of fungal infections, vaccinology for prevention of fungal infections, pathogenesis and virulence, and the molecular biology of pathogenic fungi in vitro and in vivo, including genomics, transcriptomics, metabolomics, and proteomics. Case reports are no longer accepted. In addition, studies of natural products showing inhibitory activity against pathogenic fungi are not accepted without chemical characterization and identification of the compounds responsible for the inhibitory activity.
期刊最新文献
Pulmonary aspergillosis in green sea turtles (Chelonia mydas): a case series aspergillosis in green sea turtles. Clinical utility of pharmacogenomic testing for patients with coccidioidal meningitis. Antemortem diagnostic tests for the detection of Aspergillus infection in birds: a systematic review. Geraniol inhibits both planktonic cells and biofilms of the Candida parapsilosis species complex: Highlight for the improved efficacy of amphotericin B, caspofungin and fluconazole plus Geraniol. Malassezia gallinae sp. nov., a new basidiomycetous yeast species isolated from skins of chickens.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1