An exploration of the influence of ZnO NPs treatment on germination of radish seeds under salt stress based on the YOLOv8-R lightweight model.

IF 4.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS Plant Methods Pub Date : 2024-07-23 DOI:10.1186/s13007-024-01238-8
Zhiqian Ouyang, Xiuqing Fu, Zhibo Zhong, Ruxiao Bai, Qianzhe Cheng, Ge Gao, Meng Li, Haolun Zhang, Yaben Zhang
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Abstract

Background: Since traditional germination test methods have drawbacks such as slow efficiency, proneness to error, and damage to seeds, a non-destructive testing method is proposed for full-process germination of radish seeds, which improves the monitoring efficiency of seed quality.

Results: Based on YOLOv8n, a lightweight test model YOLOv8-R is proposed, where the number of parameters, the amount of calculation, and size of weights are significantly reduced by replacing the backbone network with PP-LCNet, the neck part with CCFM, the C2f of the neck part with OREPA, the SPPF with FocalModulation, and the Detect of the head part with LADH. The ablation test and comparative test prove the performance of the model. With adoption of germination rate, germination index, and germination potential as the three vitality indicators, the seed germination phenotype collection system and YOLOv8-R model are used to analyze the full time-series sequence effects of different ZnO NPs concentrations on germination of radish seeds under varying degrees of salt stress.

Conclusions: The results show that salt stress inhibits the germination of radish seeds and that the inhibition effect is more obvious with the increased concentration of NaCl solution; in cultivation with deionized water, the germination rate of radish seeds does not change significantly with increased concentration of ZnO NPs, but the germination index and germination potential increase initially and then decline; in cultivation with NaCl solution, the germination rate, germination potential and germination index of radish seeds first increase and then decline with increased concentration of ZnO NPs.

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基于 YOLOv8-R 轻量级模型的 ZnO NPs 处理对盐胁迫下萝卜种子萌发的影响探索。
背景:由于传统的发芽试验方法存在效率慢、易出错、易损伤种子等缺点,提出了一种萝卜种子全程发芽的无损检测方法,提高了种子质量的监测效率:在 YOLOv8n 的基础上,提出了轻量级测试模型 YOLOv8-R,通过用 PP-LCNet 代替主干网络,用 CCFM 代替颈部,用 OREPA 代替颈部 C2f,用 FocalModulation 代替 SPPF,用 LADH 代替头部 Detect,大大减少了参数数量、计算量和权重大小。消融试验和比较试验证明了模型的性能。采用发芽率、发芽指数和发芽势三个生命力指标,利用种子萌发表型采集系统和YOLOv8-R模型分析了不同浓度ZnO NPs对不同程度盐胁迫下萝卜种子萌发的全时序序列影响:结果表明:盐胁迫对萝卜种子的萌发有抑制作用,且随着NaCl溶液浓度的增加,抑制作用更加明显;在去离子水培养条件下,萝卜种子的发芽率随ZnO NPs浓度的增加变化不明显,但发芽指数和发芽势先上升后下降;在NaCl溶液培养条件下,萝卜种子的发芽率、发芽势和发芽指数随ZnO NPs浓度的增加先上升后下降。
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来源期刊
Plant Methods
Plant Methods 生物-植物科学
CiteScore
9.20
自引率
3.90%
发文量
121
审稿时长
2 months
期刊介绍: Plant Methods is an open access, peer-reviewed, online journal for the plant research community that encompasses all aspects of technological innovation in the plant sciences. There is no doubt that we have entered an exciting new era in plant biology. The completion of the Arabidopsis genome sequence, and the rapid progress being made in other plant genomics projects are providing unparalleled opportunities for progress in all areas of plant science. Nevertheless, enormous challenges lie ahead if we are to understand the function of every gene in the genome, and how the individual parts work together to make the whole organism. Achieving these goals will require an unprecedented collaborative effort, combining high-throughput, system-wide technologies with more focused approaches that integrate traditional disciplines such as cell biology, biochemistry and molecular genetics. Technological innovation is probably the most important catalyst for progress in any scientific discipline. Plant Methods’ goal is to stimulate the development and adoption of new and improved techniques and research tools and, where appropriate, to promote consistency of methodologies for better integration of data from different laboratories.
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