Unrealistic Data Augmentation Improves the Robustness of Deep Learning-Based Classification of Dopamine Transporter SPECT Against Variability Between Sites and Between Cameras.

Thomas Buddenkotte, Ralph Buchert
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Abstract

We propose strongly unrealistic data augmentation to improve the robustness of convolutional neural networks (CNNs) for automatic classification of dopamine transporter SPECT against the variability between sites and between cameras. Methods: A CNN was trained on a homogeneous dataset comprising 1,100 123I-labeled 2β-carbomethoxy-3β-(4-iodophenyl)-N-(3-fluoropropyl)nortropane SPECT images using strongly unrealistic data augmentation based on gaussian blurring and additive noise. Strongly unrealistic data augmentation was compared with no augmentation and intensity-based nnU-Net augmentation on 2 independent datasets with lower (n = 645) and considerably higher (n = 640) spatial resolution. Results: The CNN trained with strongly unrealistic augmentation achieved an overall accuracy of 0.989 (95% CI, 0.978-0.996) and 0.975 (95% CI, 0.960-0.986) in the independent test datasets, which was better than that without (0.960, 95% CI, 0.942-0.974; 0.953, 95% CI, 0.934-0.968) and with nnU-Net augmentation (0.972, 95% CI, 0.956-0.983; 0.950, 95% CI, 0.930-0.966) (all McNemar P < 0.001). Conclusion: Strongly unrealistic data augmentation results in better generalization of CNN-based classification of 123I-labeled 2β-carbomethoxy-3β-(4-iodophenyl)-N-(3-fluoropropyl)nortropane SPECT images to unseen acquisition settings. We hypothesize that this can be transferred to other nuclear imaging applications.

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不切实际的数据扩增提高了基于深度学习的多巴胺转运体 SPECT 分类的稳健性,使其能够应对不同站点和不同相机之间的变异。
我们提出了强烈的非现实数据增强方法,以提高卷积神经网络(CNN)在多巴胺转运体 SPECT 自动分类中的鲁棒性,防止不同部位和不同摄像头之间的差异。方法:使用基于高斯模糊和加性噪声的强非线性数据增强,在由 1,100 张 123I 标记的 2β-carbomethoxy-3β-(4-iodophenyl)-N-(3-fluoropropyl)nortropane SPECT 图像组成的同质数据集上训练 CNN。在空间分辨率较低(n = 645)和相当高(n = 640)的两个独立数据集上,对强不真实数据增强与无增强和基于强度的 nnU-Net 增强进行了比较。结果显示在独立的测试数据集上,经过强烈非现实增强训练的 CNN 获得了 0.989(95% CI,0.978-0.996)和 0.975(95% CI,0.960-0.986)的总体准确率,优于未经过增强训练的 CNN(0.960,95% CI,0.942-0.974;0.953,95% CI,0.934-0.968)和有 nnU-Net 增强(0.972,95% CI,0.956-0.983;0.950,95% CI,0.930-0.966)(所有 McNemar P < 0.001)。结论基于 CNN 的 123I 标记 2β- 碳甲氧基-3β-(4-碘苯基)-N-(3-氟丙基)去甲丙烷 SPECT 图像的分类,在未见过的采集设置下,强非线性数据增强可产生更好的泛化效果。我们假设这可以应用到其他核成像应用中。
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