Structure of Carboxypeptidase T from Thermoactinomyces Vulgaris in Complex with L-Phenyl Lactate

IF 0.6 4区 材料科学 Q4 CRYSTALLOGRAPHY Crystallography Reports Pub Date : 2024-07-25 DOI:10.1134/S1063774524600315
V. Kh. Akparov, G. E. Konstantinova, V. I. Timofeev, M. B. Shevtsov, I. P. Kuranova
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Abstract

The crystal structure of metallocarboxypeptidase T (CPT) from Thermoactinomyces vulgaris in complex with L-phenyl lactate was determined at 1.73 Å resolution. As opposed to pancreatic carboxypeptidase A, which binds one L-phenyl lactate molecule, the ligand in the complex with CPT occupies simultaneously the S1 and S' subsites of the active site. This leads to conformational changes, which differ from those caused by the alternating occupation of the S1 and S1' subsites by tert-butyloxycarbonyl-L-leucine (BOC-leucine) and benzylsuccinic acid. These changes concern the residues E277, E59, L254, G192, S127, and Y218 and are up to 0.77 Å. A conclusion was drawn about the possible role of the residue E59 in the substrate recognition and catalysis by carboxypeptidase Т.

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来自保加利亚酵母菌的羧肽酶 T 与 L-苯基乳酸盐复合物的结构
摘要 以 1.73 Å 的分辨率测定了来自普通嗜热乳酸菌(Thermoactinomyces vulgaris)的金属羧肽酶 T(CPT)与 L-苯基乳酸盐复合物的晶体结构。与只结合一个 L-苯基乳酸盐分子的胰腺羧肽酶 A 不同,CPT 复合物中的配体同时占据活性位点的 S1 和 S'亚位点。这导致了构象变化,这种变化不同于叔丁氧羰基-L-亮氨酸(BOC-亮氨酸)和苄基丁二酸交替占据 S1 和 S1'亚位点所引起的变化。这些变化涉及 E277、E59、L254、G192、S127 和 Y218 等残基,最长达 0.77 Å。
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来源期刊
Crystallography Reports
Crystallography Reports 化学-晶体学
CiteScore
1.10
自引率
28.60%
发文量
96
审稿时长
4-8 weeks
期刊介绍: Crystallography Reports is a journal that publishes original articles short communications, and reviews on various aspects of crystallography: diffraction and scattering of X-rays, electrons, and neutrons, determination of crystal structure of inorganic and organic substances, including proteins and other biological substances; UV-VIS and IR spectroscopy; growth, imperfect structure and physical properties of crystals; thin films, liquid crystals, nanomaterials, partially disordered systems, and the methods of studies.
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