Controlling false discovery rate for mediator selection in high-dimensional data.

IF 1.4 4区 数学 Q3 BIOLOGY Biometrics Pub Date : 2024-07-01 DOI:10.1093/biomtc/ujae064
Ran Dai, Ruiyang Li, Seonjoo Lee, Ying Liu
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Abstract

The need to select mediators from a high dimensional data source, such as neuroimaging data and genetic data, arises in much scientific research. In this work, we formulate a multiple-hypothesis testing framework for mediator selection from a high-dimensional candidate set, and propose a method, which extends the recent development in false discovery rate (FDR)-controlled variable selection with knockoff to select mediators with FDR control. We show that the proposed method and algorithm achieved finite sample FDR control. We present extensive simulation results to demonstrate the power and finite sample performance compared with the existing method. Lastly, we demonstrate the method for analyzing the Adolescent Brain Cognitive Development (ABCD) study, in which the proposed method selects several resting-state functional magnetic resonance imaging connectivity markers as mediators for the relationship between adverse childhood events and the crystallized composite score in the NIH toolbox.

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控制高维数据中中介选择的错误发现率
许多科学研究都需要从神经影像数据和遗传数据等高维数据源中选择中介因子。在这项工作中,我们提出了一个从高维候选集中选择中介因子的多重假设检验框架,并提出了一种方法,该方法扩展了最近在虚假发现率(FDR)控制变量选择方面的发展,并将其用于选择具有 FDR 控制的中介因子。我们证明了所提出的方法和算法实现了有限样本 FDR 控制。我们展示了大量仿真结果,证明了与现有方法相比,该方法的强大功能和有限样本性能。最后,我们展示了分析青少年脑认知发展(ABCD)研究的方法,在该研究中,所提出的方法选择了几个静息态功能磁共振成像连接标志物,作为童年不良事件与美国国立卫生研究院工具箱中的结晶综合评分之间关系的中介因子。
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来源期刊
Biometrics
Biometrics 生物-生物学
CiteScore
2.70
自引率
5.30%
发文量
178
审稿时长
4-8 weeks
期刊介绍: The International Biometric Society is an international society promoting the development and application of statistical and mathematical theory and methods in the biosciences, including agriculture, biomedical science and public health, ecology, environmental sciences, forestry, and allied disciplines. The Society welcomes as members statisticians, mathematicians, biological scientists, and others devoted to interdisciplinary efforts in advancing the collection and interpretation of information in the biosciences. The Society sponsors the biennial International Biometric Conference, held in sites throughout the world; through its National Groups and Regions, it also Society sponsors regional and local meetings.
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