Salinibacterium soli sp. nov., isolated from lakeside soil.

IF 2 3区 生物学 Q4 MICROBIOLOGY International journal of systematic and evolutionary microbiology Pub Date : 2024-07-01 DOI:10.1099/ijsem.0.006479
Yingying Wan, Miaohuan Xiong, Lingfeng Zhu, Haiyan Ni, Xuelan Chen, Bin Liu, Jian He
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Abstract

A Gram-stain-positive, rod-shaped, non-spore-forming and non-motile bacterium, designated strain WY-16T. Growth was observed at 20-42 °C (optimum, 30 °C), pH 6-9 (optimum, pH 7) and salinity of 0-3 % (w/v; optimum, 1 %). Phylogenetic analysis based on genome sequences indicated that WY-16T was affiliated to the family Microbacteriaceae and most closely related to Salinibacterium xinjiangense and Salinibacterium amurskyense. The average nucleotide identity values between strain WY-16T and S. xinjiangense and S. amurskyense were 74.7 and 72.5 %, respectively. The digital DNA-DNA hybridization values between strain WY-16T and S. xinjiangense and S. amurskyense were 19.6 and 18.6 %, respectively. The predominant fatty acids were anteiso-C15 : 0, iso-C16 : 0 and iso-C16 : 0 10-methyl. The major menaquinones were MK-12, MK-13, MK-14 and MK-15. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, one unidentified glycolipid and one unidentified phospholipid. The cell-wall peptidoglycan contained 2,4-diaminobutyric acid as the diamino acid and ribose, rhamnose, glucose and galactose were the major cell-wall sugars. Based on phenotypic, genotypic and phylogenetic evidence, strain WY-16T represents a novel species in the genus Salinibacterium, for which the name Salinibacterium soli sp. nov. is proposed. The type strain is WY-16T (=GDMCC 1.4011T=JCM 36421T).

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从湖边土壤中分离出来的 Salinibacterium soli sp.
一种革兰氏染色阳性、杆状、不形成孢子、不运动的细菌,命名为 WY-16T 菌株。该菌株在 20-42 °C(最适温度为 30 °C)、pH 值为 6-9 (最适 pH 值为 7)和盐度为 0-3 %(w/v;最适盐度为 1 %)的条件下生长。基于基因组序列的系统发育分析表明,WY-16T 属于微细菌科,与新疆盐渍菌(Salinibacterium xinjiangense)和马尔斯基盐渍菌(Salinibacterium amurskyense)的亲缘关系最为密切。WY-16T菌株与新疆盐渍菌(S. xinjiangense)和马尔斯基盐渍菌(S. amurskyense)的平均核苷酸同一性分别为74.7%和72.5%。WY-16T菌株与新疆鼠尾草菌(S. xinjiangense)和阿马斯基草菌(S. amurskyense)的数字DNA-DNA杂交值分别为19.6%和18.6%。主要脂肪酸为前异-C15 :0、异-C16 :0 和异-C16 :0 10-甲基。主要的甲萘醌为 MK-12、MK-13、MK-14 和 MK-15。主要的极性脂质为二磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、一种不明糖脂和一种不明磷脂。细胞壁肽聚糖含有 2,4-二氨基丁酸作为二氨基酸,核糖、鼠李糖、葡萄糖和半乳糖是细胞壁的主要糖类。根据表型、基因型和系统发育证据,WY-16T 菌株代表了 Salinibacterium 属中的一个新物种,并将其命名为 Salinibacterium soli sp.模式菌株为 WY-16T(=GDMCC 1.4011T=JCM 36421T)。
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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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