M3: using mask-attention and multi-scale for multi-modal brain MRI classification

IF 2.5 4区 医学 Q2 MATHEMATICAL & COMPUTATIONAL BIOLOGY Frontiers in Neuroinformatics Pub Date : 2024-07-29 DOI:10.3389/fninf.2024.1403732
Guanqing Kong, Chuanfu Wu, Zongqiu Zhang, Chuansheng Yin, Dawei Qin
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Abstract

IntroductionBrain diseases, particularly the classification of gliomas and brain metastases and the prediction of HT in strokes, pose significant challenges in healthcare. Existing methods, relying predominantly on clinical data or imaging-based techniques such as radiomics, often fall short in achieving satisfactory classification accuracy. These methods fail to adequately capture the nuanced features crucial for accurate diagnosis, often hindered by noise and the inability to integrate information across various scales.MethodsWe propose a novel approach that mask attention mechanisms with multi-scale feature fusion for Multimodal brain disease classification tasks, termed M3, which aims to extract features highly relevant to the disease. The extracted features are then dimensionally reduced using Principal Component Analysis (PCA), followed by classification with a Support Vector Machine (SVM) to obtain the predictive results.ResultsOur methodology underwent rigorous testing on multi-parametric MRI datasets for both brain tumors and strokes. The results demonstrate a significant improvement in addressing critical clinical challenges, including the classification of gliomas, brain metastases, and the prediction of hemorrhagic stroke transformations. Ablation studies further validate the effectiveness of our attention mechanism and feature fusion modules.DiscussionThese findings underscore the potential of our approach to meet and exceed current clinical diagnostic demands, offering promising prospects for enhancing healthcare outcomes in the diagnosis and treatment of brain diseases.
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M3:利用遮挡注意力和多尺度进行多模态脑磁共振成像分类
导言脑部疾病,尤其是胶质瘤和脑转移瘤的分类以及脑卒中高血压的预测,给医疗保健带来了巨大挑战。现有的方法主要依赖临床数据或基于成像的技术(如放射组学),往往无法达到令人满意的分类准确性。这些方法未能充分捕捉到对准确诊断至关重要的细微特征,往往受到噪声和无法整合不同尺度信息的阻碍。方法我们提出了一种新方法,将注意力机制与多尺度特征融合,用于多模态脑疾病分类任务,称为 M3,旨在提取与疾病高度相关的特征。然后使用主成分分析法(PCA)对提取的特征进行降维处理,再使用支持向量机(SVM)进行分类,从而获得预测结果。结果我们的方法在脑肿瘤和脑卒中的多参数磁共振成像数据集上进行了严格测试。结果表明,在应对关键临床挑战方面,包括胶质瘤、脑转移瘤的分类以及出血性中风转变的预测方面,我们的方法都有了显著的改进。消融研究进一步验证了我们的注意机制和特征融合模块的有效性。 讨论这些发现强调了我们的方法在满足和超越当前临床诊断需求方面的潜力,为提高脑部疾病诊断和治疗的医疗效果提供了广阔的前景。
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来源期刊
Frontiers in Neuroinformatics
Frontiers in Neuroinformatics MATHEMATICAL & COMPUTATIONAL BIOLOGY-NEUROSCIENCES
CiteScore
4.80
自引率
5.70%
发文量
132
审稿时长
14 weeks
期刊介绍: Frontiers in Neuroinformatics publishes rigorously peer-reviewed research on the development and implementation of numerical/computational models and analytical tools used to share, integrate and analyze experimental data and advance theories of the nervous system functions. Specialty Chief Editors Jan G. Bjaalie at the University of Oslo and Sean L. Hill at the École Polytechnique Fédérale de Lausanne are supported by an outstanding Editorial Board of international experts. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics and the public worldwide. Neuroscience is being propelled into the information age as the volume of information explodes, demanding organization and synthesis. Novel synthesis approaches are opening up a new dimension for the exploration of the components of brain elements and systems and the vast number of variables that underlie their functions. Neural data is highly heterogeneous with complex inter-relations across multiple levels, driving the need for innovative organizing and synthesizing approaches from genes to cognition, and covering a range of species and disease states. Frontiers in Neuroinformatics therefore welcomes submissions on existing neuroscience databases, development of data and knowledge bases for all levels of neuroscience, applications and technologies that can facilitate data sharing (interoperability, formats, terminologies, and ontologies), and novel tools for data acquisition, analyses, visualization, and dissemination of nervous system data. Our journal welcomes submissions on new tools (software and hardware) that support brain modeling, and the merging of neuroscience databases with brain models used for simulation and visualization.
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