Occupational modulation in the (3+1)-dimensional incommensurate structure of (2S,3S)-2-amino-3-hydroxy-3-methyl-4-phenoxybutanoic acid dihydrate.

IF 0.7 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Acta Crystallographica Section C Structural Chemistry Pub Date : 2024-09-01 Epub Date: 2024-08-08 DOI:10.1107/S2053229624007009
Kyana M Sanders, Samantha K Bruffy, Andrew R Buller, Václav Petříček, Ilia A Guzei
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Abstract

The incommensurately modulated structure of (2S,3S)-2-amino-3-hydroxy-3-methyl-4-phenoxybutanoic acid dihydrate (C11H15NO4·2H2O or I·2H2O) is described in the (3+1)-dimensional superspace group P212121(0β0)000 (β = 0.357). The loss of the three-dimensional periodicity is ascribed to the occupational modulation of one positionally disordered solvent water molecule, where the two positions are related by a small translation [ca 0.666 (9) Å] and ∼168 (5)° rotation about one of its O-H bonds, with an average 0.624 (3):0.376 (3) occupancy ratio. The occupational modulation of this molecule arises due to the competition between the different hydrogen-bonding motifs associated with each position. The structure can be very well refined in the average approximation (all satellite reflections disregarded) in the space group P212121, with the water molecule refined as disordered over two positions in a 0.625 (16):0.375 (16) ratio. The refinement in the commensurate threefold supercell approximation in the space group P1121 is also of high quality, with the six corresponding water molecules exhibiting three different occupancy ratios averaging 0.635:0.365.

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(2S,3S)-2-氨基-3-羟基-3-甲基-4-苯氧基丁酸二水合物的 (3+1)-dimensional incommensurate 结构中的职业调制。
(2S,3S)-2-氨基-3-羟基-3-甲基-4-苯氧基丁酸二水合物(C11H15NO4-2H2O 或 I-2H2O)的非同调结构是在(3+1)维超空间群 P212121(0β0)000(β = 0.357)中描述的。三维周期性的丧失归因于一个位置无序的溶剂水分子的占位调制,其中两个位置通过围绕其一个 O-H 键的微小平移[约 0.666 (9) Å]和∼168 (5)° 旋转相关联,平均占位比为 0.624 (3):0.376 (3)。该分子的占位调节是由于与每个位置相关的不同氢键图案之间的竞争造成的。根据平均近似(忽略所有卫星反射),该结构在空间群 P212121 中得到了很好的细化,水分子在两个位置上以 0.625 (16):0.375 (16) 的比例被细化为无序。在空间群 P1121 中,以相称的三倍超胞近似进行的细化也是高质量的,六个相应的水分子表现出三种不同的占据比,平均为 0.635:0.365。
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来源期刊
Acta Crystallographica Section C Structural Chemistry
Acta Crystallographica Section C Structural Chemistry CHEMISTRY, MULTIDISCIPLINARYCRYSTALLOGRAPH-CRYSTALLOGRAPHY
CiteScore
1.60
自引率
12.50%
发文量
148
期刊介绍: Acta Crystallographica Section C: Structural Chemistry is continuing its transition to a journal that publishes exciting science with structural content, in particular, important results relating to the chemical sciences. Section C is the journal of choice for the rapid publication of articles that highlight interesting research facilitated by the determination, calculation or analysis of structures of any type, other than macromolecular structures. Articles that emphasize the science and the outcomes that were enabled by the study are particularly welcomed. Authors are encouraged to include mainstream science in their papers, thereby producing manuscripts that are substantial scientific well-rounded contributions that appeal to a broad community of readers and increase the profile of the authors.
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