Predicting gestational diabetes mellitus risk at 11-13 weeks' gestation: the role of extrachromosomal circular DNA.

IF 8.5 1区 医学 Q1 CARDIAC & CARDIOVASCULAR SYSTEMS Cardiovascular Diabetology Pub Date : 2024-08-07 DOI:10.1186/s12933-024-02381-1
Jin Wang, Pengyu Huang, Fei Hou, Dongdong Hao, Wushan Li, Hua Jin
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Abstract

Background: Gestational diabetes mellitus (GDM) significantly impacts maternal and infant health both immediately and over the long term, yet effective early diagnostic biomarkers are currently lacking. Thus, it is essential to identify early diagnostic biomarkers for GDM risk screening. Extrachromosomal circular DNA (eccDNA), being more stable than linear DNA and involved in disease pathologies, is a viable biomarker candidate for diverse conditions. In this study, eccDNA biomarkers identified for early diagnosis and assessment of GDM risk were explored.

Methods: Using Circle-seq, we identified plasma eccDNA profiles in five pregnant women who later developed GDM and five matched healthy controls at 11-13 weeks of gestation. These profiles were subsequently analyzed through bioinformatics and validated through outward PCR combined with Sanger sequencing. Furthermore, candidate eccDNA was validated by quantitative PCR (qPCR) in a larger cohort of 70 women who developed GDM and 70 normal glucose-tolerant (NGT) subjects. A ROC curve assessed the eccDNA's diagnostic potential for GDM.

Results: 2217 eccDNAs were differentially detected between future GDM patients and controls, with 1289 increased and 928 decreased in abundance. KEGG analysis linked eccDNA genes mainly to GDM-related pathways such as Rap1, MAPK, and PI3K-Akt, and Insulin resistance, among others. Validation confirmed a significant decrease in eccDNA PRDM16circle in the plasma of 70 women who developed GDM compared to 70 NGT women, consistent with the eccDNA-seq results. PRDM16circle showed significant diagnostic value in 11-13 weeks of gestation (AUC = 0.941, p < 0.001).

Conclusions: Our study first demonstrats that eccDNAs are aberrantly produced in women who develop GDM, including PRDM16circle, which can predict GDM at an early stage of pregnancy, indicating its potential as a biomarker.

Trial registration: ChiCTR2300075971, http://www.chictr.org.cn . Registered 20 September 2023.

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预测妊娠 11-13 周时的妊娠糖尿病风险:染色体外环状 DNA 的作用。
背景:妊娠期糖尿病(GDM)对母婴健康的直接和长期影响都很大,但目前还缺乏有效的早期诊断生物标志物。因此,为 GDM 风险筛查确定早期诊断生物标志物至关重要。染色体外环状脱氧核糖核酸(eccDNA)比线性脱氧核糖核酸更稳定,并参与疾病的病理过程,是多种疾病的可行候选生物标志物。本研究探讨了用于早期诊断和评估 GDM 风险的 eccDNA 生物标记物:方法:利用Circle-seq技术,我们鉴定了5名后来患上GDM的孕妇和5名妊娠11-13周的匹配健康对照者的血浆cccDNA图谱。随后,我们通过生物信息学分析了这些特征,并通过外向聚合酶链反应(outward PCR)结合桑格测序(Sanger sequencing)进行了验证。此外,候选的 eccDNA 还通过定量 PCR(qPCR)在 70 名患 GDM 的妇女和 70 名正常糖耐量(NGT)受试者组成的更大队列中进行了验证。结果:在未来的GDM患者和对照组中,共检测到2217个ccDNA,其中1289个丰度增加,928个丰度减少。KEGG分析显示,eccDNA基因主要与GDM相关通路有关,如Rap1、MAPK、PI3K-Akt和胰岛素抵抗等。验证证实,与 70 名 NGT 妇女相比,70 名 GDM 妇女血浆中的 eccDNA PRDM16circle 明显减少,这与 eccDNA-seq 的结果一致。PRDM16circle在妊娠11-13周时显示出显著的诊断价值(AUC = 0.941,p 结论):我们的研究首次证明了eccDNA在罹患GDM的妇女体内异常产生,包括PRDM16circle,它可以在妊娠早期预测GDM,显示了其作为生物标志物的潜力:ChiCTR2300075971, http://www.chictr.org.cn 。注册日期:2023 年 9 月 20 日。
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来源期刊
Cardiovascular Diabetology
Cardiovascular Diabetology 医学-内分泌学与代谢
CiteScore
12.30
自引率
15.10%
发文量
240
审稿时长
1 months
期刊介绍: Cardiovascular Diabetology is a journal that welcomes manuscripts exploring various aspects of the relationship between diabetes, cardiovascular health, and the metabolic syndrome. We invite submissions related to clinical studies, genetic investigations, experimental research, pharmacological studies, epidemiological analyses, and molecular biology research in this field.
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