Identification of phytoestrogens as sirtuin inhibitor against breast cancer: Multitargeted approach

IF 2.6 4区 生物学 Q2 BIOLOGY Computational Biology and Chemistry Pub Date : 2024-08-07 DOI:10.1016/j.compbiolchem.2024.108168
Venkateswarlu Kojja , Vanitha Rudraram , Bhanukiran Kancharla , Hemalatha Siva , Anjana Devi Tangutur , Prasanta Kumar Nayak
{"title":"Identification of phytoestrogens as sirtuin inhibitor against breast cancer: Multitargeted approach","authors":"Venkateswarlu Kojja ,&nbsp;Vanitha Rudraram ,&nbsp;Bhanukiran Kancharla ,&nbsp;Hemalatha Siva ,&nbsp;Anjana Devi Tangutur ,&nbsp;Prasanta Kumar Nayak","doi":"10.1016/j.compbiolchem.2024.108168","DOIUrl":null,"url":null,"abstract":"<div><p>Despite progress in diagnosis and treatment strategies, breast cancer remains a primary risk to female health as indicated by second most cancer-deaths globally caused by this cancer. High risk mutation is linked to prognosis of breast cancer. Due to high resistance of breast cancer against current therapies, there is necessity of novel treatment strategies. Sirtuins are signaling proteins belonging to histone deacetylase class III family, known to control several cellular processes. Therefore, targeting sirtuins could be one of the approaches to treat breast cancer. Several plants synthesize phytoestrogens which exhibit structural and physiological similarities to estrogens and have been recognized to possess anticancer activity. In our study, we investigated several phytoestrogens for sirtuin inhibition by conducting molecular docking studies, and <em>in-vitro</em> studies against breast cancer cell lines. In molecular docking studies, we identified coumestrol possessing high binding energy with sirtuin proteins 1–3 as compared to other phytoestrogens. The molecular dynamic studies showed stable interaction of ligand and protein with higher affinity at sirtuin proteins 1–3 binding sites. In cell proliferation assay and colony formation assay using breast cancer cell lines (MCF-7 and MDAMB-231) coumestrol caused significant reduction in cell proliferation and number of colonies formed. Further, the flow cytometric analysis showed that coumestrol induces intracellular reactive oxygen species and the western blot analysis revealed reduction in the level of SIRT-1 expression in breast cancer cell lines. In conclusion, <em>in-silico</em> data and <em>in-vitro</em> studies suggest that the phytoestrogen coumestrol has sirtuin inhibitory activity against breast cancer.</p></div>","PeriodicalId":10616,"journal":{"name":"Computational Biology and Chemistry","volume":"112 ","pages":"Article 108168"},"PeriodicalIF":2.6000,"publicationDate":"2024-08-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computational Biology and Chemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1476927124001567","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Despite progress in diagnosis and treatment strategies, breast cancer remains a primary risk to female health as indicated by second most cancer-deaths globally caused by this cancer. High risk mutation is linked to prognosis of breast cancer. Due to high resistance of breast cancer against current therapies, there is necessity of novel treatment strategies. Sirtuins are signaling proteins belonging to histone deacetylase class III family, known to control several cellular processes. Therefore, targeting sirtuins could be one of the approaches to treat breast cancer. Several plants synthesize phytoestrogens which exhibit structural and physiological similarities to estrogens and have been recognized to possess anticancer activity. In our study, we investigated several phytoestrogens for sirtuin inhibition by conducting molecular docking studies, and in-vitro studies against breast cancer cell lines. In molecular docking studies, we identified coumestrol possessing high binding energy with sirtuin proteins 1–3 as compared to other phytoestrogens. The molecular dynamic studies showed stable interaction of ligand and protein with higher affinity at sirtuin proteins 1–3 binding sites. In cell proliferation assay and colony formation assay using breast cancer cell lines (MCF-7 and MDAMB-231) coumestrol caused significant reduction in cell proliferation and number of colonies formed. Further, the flow cytometric analysis showed that coumestrol induces intracellular reactive oxygen species and the western blot analysis revealed reduction in the level of SIRT-1 expression in breast cancer cell lines. In conclusion, in-silico data and in-vitro studies suggest that the phytoestrogen coumestrol has sirtuin inhibitory activity against breast cancer.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
鉴定可作为乳腺癌 sirtuin 抑制剂的植物雌激素:多靶点方法。
尽管在诊断和治疗策略方面取得了进展,但乳腺癌仍然是女性健康的主要风险,全球因乳腺癌死亡的人数位居第二。高风险突变与乳腺癌的预后有关。由于乳腺癌对目前的疗法有很强的抵抗力,因此需要新的治疗策略。Sirtuins 是属于组蛋白去乙酰化酶 III 类家族的信号蛋白,已知可控制多个细胞过程。因此,靶向 Sirtuins 可能是治疗乳腺癌的方法之一。有几种植物能合成植物雌激素,它们在结构上和生理上与雌激素相似,并被认为具有抗癌活性。在我们的研究中,我们通过分子对接研究和针对乳腺癌细胞系的体外研究,研究了几种植物雌激素对 sirtuin 的抑制作用。在分子对接研究中,我们发现与其他植物雌激素相比,香豆素与 sirtuin 蛋白 1-3 具有较高的结合能。分子动力学研究表明,配体与蛋白质的相互作用非常稳定,在sirtuin蛋白1-3的结合位点具有更高的亲和力。在使用乳腺癌细胞系(MCF-7 和 MDAMB-231)进行的细胞增殖试验和菌落形成试验中,香豆素可显著减少细胞增殖和菌落形成的数量。此外,流式细胞分析表明,库美司特醇会诱导细胞内的活性氧,Western 印迹分析表明,乳腺癌细胞株中 SIRT-1 的表达水平降低。总之,体内数据和体外研究表明,植物雌激素香雌醇具有抑制乳腺癌的 Sirtuin 活性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Computational Biology and Chemistry
Computational Biology and Chemistry 生物-计算机:跨学科应用
CiteScore
6.10
自引率
3.20%
发文量
142
审稿时长
24 days
期刊介绍: Computational Biology and Chemistry publishes original research papers and review articles in all areas of computational life sciences. High quality research contributions with a major computational component in the areas of nucleic acid and protein sequence research, molecular evolution, molecular genetics (functional genomics and proteomics), theory and practice of either biology-specific or chemical-biology-specific modeling, and structural biology of nucleic acids and proteins are particularly welcome. Exceptionally high quality research work in bioinformatics, systems biology, ecology, computational pharmacology, metabolism, biomedical engineering, epidemiology, and statistical genetics will also be considered. Given their inherent uncertainty, protein modeling and molecular docking studies should be thoroughly validated. In the absence of experimental results for validation, the use of molecular dynamics simulations along with detailed free energy calculations, for example, should be used as complementary techniques to support the major conclusions. Submissions of premature modeling exercises without additional biological insights will not be considered. Review articles will generally be commissioned by the editors and should not be submitted to the journal without explicit invitation. However prospective authors are welcome to send a brief (one to three pages) synopsis, which will be evaluated by the editors.
期刊最新文献
Screening and computational characterization of novel antimicrobial cathelicidins from amphibian transcriptomic data Pharmacophore-guided in-silico discovery of SIRT1 inhibitors for targeted cancer therapy A multi-layer neural network approach for the stability analysis of the Hepatitis B model Unveiling the distinctive variations in multi-omics triggered by TP53 mutation in lung cancer subtypes: An insight from interaction among intratumoral microbiota, tumor microenvironment, and pathology Autoencoder-based drug synergy framework for malignant diseases
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1