{"title":"Early detection of abiotic stress in plants through SNARE proteins using hybrid feature fusion model","authors":"Bhargavi T., Sumathi D.","doi":"10.7717/peerj-cs.2149","DOIUrl":null,"url":null,"abstract":"Agriculture is the main source of livelihood for most of the population across the globe. Plants are often considered life savers for humanity, having evolved complex adaptations to cope with adverse environmental conditions. Protecting agricultural produce from devastating conditions such as stress is essential for the sustainable development of the nation. Plants respond to various environmental stressors such as drought, salinity, heat, cold, etc. Abiotic stress can significantly impact crop yield and development posing a major threat to agriculture. SNARE proteins play a major role in pathological processes as they are vital proteins in the life sciences. These proteins act as key players in stress responses. Feature extraction is essential for visualizing the underlying structure of the SNARE proteins in analyzing the root cause of abiotic stress in plants. To address this issue, we developed a hybrid model to capture the hidden structures of the SNAREs. A feature fusion technique has been devised by combining the potential strengths of convolutional neural networks (CNN) with a high dimensional radial basis function (RBF) network. Additionally, we employ a bi-directional long short-term memory (Bi-LSTM) network to classify the presence of SNARE proteins. Our feature fusion model successfully identified abiotic stress in plants with an accuracy of 74.6%. When compared with various existing frameworks, our model demonstrates superior classification results.","PeriodicalId":54224,"journal":{"name":"PeerJ Computer Science","volume":"43 1","pages":""},"PeriodicalIF":3.5000,"publicationDate":"2024-08-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"PeerJ Computer Science","FirstCategoryId":"94","ListUrlMain":"https://doi.org/10.7717/peerj-cs.2149","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE","Score":null,"Total":0}
引用次数: 0
Abstract
Agriculture is the main source of livelihood for most of the population across the globe. Plants are often considered life savers for humanity, having evolved complex adaptations to cope with adverse environmental conditions. Protecting agricultural produce from devastating conditions such as stress is essential for the sustainable development of the nation. Plants respond to various environmental stressors such as drought, salinity, heat, cold, etc. Abiotic stress can significantly impact crop yield and development posing a major threat to agriculture. SNARE proteins play a major role in pathological processes as they are vital proteins in the life sciences. These proteins act as key players in stress responses. Feature extraction is essential for visualizing the underlying structure of the SNARE proteins in analyzing the root cause of abiotic stress in plants. To address this issue, we developed a hybrid model to capture the hidden structures of the SNAREs. A feature fusion technique has been devised by combining the potential strengths of convolutional neural networks (CNN) with a high dimensional radial basis function (RBF) network. Additionally, we employ a bi-directional long short-term memory (Bi-LSTM) network to classify the presence of SNARE proteins. Our feature fusion model successfully identified abiotic stress in plants with an accuracy of 74.6%. When compared with various existing frameworks, our model demonstrates superior classification results.
期刊介绍:
PeerJ Computer Science is the new open access journal covering all subject areas in computer science, with the backing of a prestigious advisory board and more than 300 academic editors.