Diana L. Giraldo, Hamza Khan, Gustavo Pineda, Zhihua Liang, Alfonso Lozano Castillo, Bart Van Wijmeersch, Henry Woodruff, Philippe Lambin, Eduardo Romero, Liesbet M. Peeters, Jan Sijbers
{"title":"Perceptual super-resolution in multiple sclerosis MRI","authors":"Diana L. Giraldo, Hamza Khan, Gustavo Pineda, Zhihua Liang, Alfonso Lozano Castillo, Bart Van Wijmeersch, Henry Woodruff, Philippe Lambin, Eduardo Romero, Liesbet M. Peeters, Jan Sijbers","doi":"10.1101/2024.08.02.24311394","DOIUrl":null,"url":null,"abstract":"Magnetic resonance imaging (MRI) is crucial for diagnosing and monitoring of multiple sclerosis (MS) as it is used to assess lesions in the brain and spinal cord. However, in real-world clinical settings, MRI scans are often acquired with thick slices, limiting their utility for automated quantitative analyses. This work presents a single-image super-resolution (SR) reconstruction framework that leverages SR convolutional neural networks (CNN) to enhance the through-plane resolution of structural MRI in people with MS (PwMS). Our strategy involves the supervised fine-tuning of CNN architectures, guided by a content loss function that promotes perceptual quality, as well as reconstruction accuracy, to recover high-level image features. Extensive evaluation with MRI data of PwMS shows that our SR strategy leads to more accurate MRI reconstructions than competing methods. Furthermore, it improves lesion segmentation on low-resolution MRI, approaching the performance achievable with high-resolution images. Results demonstrate the potential of our SR framework to facilitate the use of low-resolution retrospective MRI from real-world clinical settings to investigate quantitative image-based biomarkers of MS.","PeriodicalId":501358,"journal":{"name":"medRxiv - Radiology and Imaging","volume":"166 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-08-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"medRxiv - Radiology and Imaging","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1101/2024.08.02.24311394","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Magnetic resonance imaging (MRI) is crucial for diagnosing and monitoring of multiple sclerosis (MS) as it is used to assess lesions in the brain and spinal cord. However, in real-world clinical settings, MRI scans are often acquired with thick slices, limiting their utility for automated quantitative analyses. This work presents a single-image super-resolution (SR) reconstruction framework that leverages SR convolutional neural networks (CNN) to enhance the through-plane resolution of structural MRI in people with MS (PwMS). Our strategy involves the supervised fine-tuning of CNN architectures, guided by a content loss function that promotes perceptual quality, as well as reconstruction accuracy, to recover high-level image features. Extensive evaluation with MRI data of PwMS shows that our SR strategy leads to more accurate MRI reconstructions than competing methods. Furthermore, it improves lesion segmentation on low-resolution MRI, approaching the performance achievable with high-resolution images. Results demonstrate the potential of our SR framework to facilitate the use of low-resolution retrospective MRI from real-world clinical settings to investigate quantitative image-based biomarkers of MS.
磁共振成像(MRI)是诊断和监测多发性硬化症(MS)的关键,因为它可用于评估大脑和脊髓的病变。然而,在现实世界的临床环境中,磁共振成像扫描通常采用厚切片采集,限制了其在自动定量分析中的应用。这项研究提出了一种单图像超分辨率(SR)重建框架,利用 SR 卷积神经网络(CNN)来提高多发性硬化症(PwMS)患者结构性 MRI 的通面分辨率。我们的策略包括在内容损失函数的指导下对 CNN 架构进行有监督的微调,以提高感知质量和重建准确性,从而恢复高级图像特征。使用 PwMS 核磁共振数据进行的广泛评估表明,与其他竞争方法相比,我们的 SR 策略能带来更准确的核磁共振重建。此外,它还改善了低分辨率核磁共振成像的病灶分割,接近高分辨率图像所能达到的性能。研究结果表明,我们的 SR 框架有潜力促进低分辨率回顾性 MRI 在实际临床环境中的应用,从而研究基于图像的 MS 定量生物标记物。