Furfural tolerance of mutant Saccharomyces cerevisiae selected via ionizing radiation combined with adaptive laboratory evolution

IF 6.1 1区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Biotechnology for Biofuels Pub Date : 2024-08-22 DOI:10.1186/s13068-024-02562-w
Junle Ren, Miaomiao Zhang, Xiaopeng Guo, Xiang Zhou, Nan Ding, Cairong Lei, Chenglin Jia, Yajuan Wang, Jingru Zhao, Ziyi Dong, Dong Lu
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Abstract

Background

Lignocellulose is a renewable and sustainable resource used to produce second-generation biofuel ethanol to cope with the resource and energy crisis. Furfural is the most toxic inhibitor of Saccharomyces cerevisiae cells produced during lignocellulose treatment, and can reduce the ability of S. cerevisiae to utilize lignocellulose, resulting in low bioethanol yield. In this study, multiple rounds of progressive ionizing radiation was combined with adaptive laboratory evolution to improve the furfural tolerance of S. cerevisiae and increase the yield of ethanol.

Results

In this study, the strategy of multiple rounds of progressive X-ray radiation combined with adaptive laboratory evolution significantly improved the furfural tolerance of brewing yeast. After four rounds of experiments, four mutant strains resistant to high concentrations of furfural were obtained (SCF-R1, SCF-R2, SCF-R3, and SCF-R4), with furfural tolerance concentrations of 4.0, 4.2, 4.4, and 4.5 g/L, respectively. Among them, the mutant strain SCF-R4 obtained in the fourth round of radiation had a cellular malondialdehyde content of 49.11 nmol/mg after 3 h of furfural stress, a weakening trend in mitochondrial membrane potential collapse, a decrease in accumulated reactive oxygen species, and a cell death rate of 12.60%, showing better cell membrane integrity, stable mitochondrial function, and an improved ability to limit reactive oxygen species production compared to the other mutant strains and the wild-type strain. In a fermentation medium containing 3.5 g/L furfural, the growth lag phase of the SCF-R4 mutant strain was shortened, and its growth ability significantly improved. After 96 h of fermentation, the ethanol production of the mutant strain SCF-R4 was 1.86 times that of the wild-type, indicating that with an increase in the number of irradiation rounds, the furfural tolerance of the mutant strain SCF-R4 was effectively enhanced. In addition, through genome-transcriptome analysis, potential sites related to furfural detoxification were identified, including GAL7, MAE1, PDC6, HXT1, AUS1, and TPK3.

Conclusions

These results indicate that multiple rounds of progressive X-ray radiation combined with adaptive laboratory evolution is an effective mutagenic strategy for obtaining furfural-tolerant mutants and that it has the potential to tap genes related to the furfural detoxification mechanism.

Graphical Abstract

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通过电离辐射和实验室适应性进化筛选出的突变体酿酒酵母的糠醛耐受性。
背景:木质纤维素是一种可再生、可持续的资源,用于生产第二代生物燃料乙醇,以应对资源和能源危机。糠醛是木质纤维素处理过程中产生的对酿酒酵母细胞毒性最大的抑制剂,可降低酿酒酵母利用木质纤维素的能力,导致生物乙醇产量低下。在这项研究中,多轮渐进电离辐射与适应性实验室进化相结合,改善了 S. cerevisiae 的糠醛耐受性,提高了乙醇产量:在这项研究中,多轮渐进式 X 射线辐射与实验室适应性进化相结合的策略显著提高了酿酒酵母对糠醛的耐受性。经过四轮实验,获得了四株耐高浓度糠醛的突变菌株(SCF-R1、SCF-R2、SCF-R3 和 SCF-R4),其糠醛耐受浓度分别为 4.0、4.2、4.4 和 4.5 g/L。其中,第四轮辐射得到的突变株SCF-R4在3 h糠醛胁迫后细胞丙二醛含量为49.11 nmol/mg,线粒体膜电位崩溃趋势减弱,积累的活性氧减少,细胞死亡率为12.60%,与其他突变株和野生型菌株相比,细胞膜完整性更好,线粒体功能稳定,限制活性氧产生的能力提高。在含有 3.5 g/L 糠醛的发酵培养基中,SCF-R4 突变菌株的生长滞后期缩短,生长能力显著提高。发酵 96 h 后,突变株 SCF-R4 的乙醇产量是野生型的 1.86 倍,表明随着辐照次数的增加,突变株 SCF-R4 的糠醛耐受性得到了有效提高。此外,通过基因组转录组分析,还发现了与糠醛解毒相关的潜在位点,包括GAL7、MAE1、PDC6、HXT1、AUS1和TPK3:这些结果表明,多轮渐进式 X 射线辐射与实验室适应性进化相结合是获得耐受糠醛突变体的有效诱变策略,而且有可能挖掘出与糠醛解毒机制相关的基因。
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来源期刊
Biotechnology for Biofuels
Biotechnology for Biofuels 工程技术-生物工程与应用微生物
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审稿时长
2.7 months
期刊介绍: Biotechnology for Biofuels is an open access peer-reviewed journal featuring high-quality studies describing technological and operational advances in the production of biofuels, chemicals and other bioproducts. The journal emphasizes understanding and advancing the application of biotechnology and synergistic operations to improve plants and biological conversion systems for the biological production of these products from biomass, intermediates derived from biomass, or CO2, as well as upstream or downstream operations that are integral to biological conversion of biomass. Biotechnology for Biofuels focuses on the following areas: • Development of terrestrial plant feedstocks • Development of algal feedstocks • Biomass pretreatment, fractionation and extraction for biological conversion • Enzyme engineering, production and analysis • Bacterial genetics, physiology and metabolic engineering • Fungal/yeast genetics, physiology and metabolic engineering • Fermentation, biocatalytic conversion and reaction dynamics • Biological production of chemicals and bioproducts from biomass • Anaerobic digestion, biohydrogen and bioelectricity • Bioprocess integration, techno-economic analysis, modelling and policy • Life cycle assessment and environmental impact analysis
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