Yuragi biomarker concept for evaluating human induced pluripotent stem cells using heterogeneity-based Raman finger-printing.

IF 1.6 Q4 BIOPHYSICS Biophysics and physicobiology Pub Date : 2024-03-22 eCollection Date: 2024-01-01 DOI:10.2142/biophysico.bppb-v21.s016
Hideaki Fujita, Takayuki Haruki, Kazuhiro Sudo, Yumiko Koga, Yukio Nakamura, Kuniya Abe, Yasuhiko Yoshida, Keiichi Koizumi, Tomonobu M Watanabe
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Abstract

Considering the fundamental mechanism causing singularity phenomena, we performed the following abduction: Assuming that a multicellular system is driven by spontaneous fluctuation of each cell and dynamic interaction of the cells, state transition of the system would be experimentally predictable from cellular heterogeneity. This study evaluates the abductive hypothesis by analyzing cellular heterogeneity to distinguish pre-state of state transition of differentiating cells with Raman spectroscopy and human induced pluripotent stem cells (hiPSCs) technique. Herein, we investigated the time development of cellular heterogeneity in Raman spectra during cardiomyogenesis of six hiPSC lines and tested two types of analyses for heterogeneity. As expected, some spectral peaks, possibly attributed to glycogen, correctively exhibited higher heterogeneity, prior to intensity changes of the spectrum in the both analyses in the all cell-lines tested. The combination of spectral data and heterogeneity-based analysis will be an approach to the arrival of biology that uses not only signal intensity but also heterogeneity as a biological index.

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利用基于异质性的拉曼指纹图谱评估人类诱导多能干细胞的 Yuragi 生物标记概念。
考虑到导致奇异现象的基本机制,我们进行了如下归纳:假设多细胞系统是由每个细胞的自发波动和细胞间的动态相互作用驱动的,那么系统的状态转换就可以通过细胞异质性进行实验预测。本研究利用拉曼光谱和人类诱导多能干细胞(hiPSCs)技术,通过分析细胞异质性来区分分化细胞的状态转换前状态,从而对归纳假说进行评估。在此,我们研究了六种 hiPSC 品系心肌发生过程中拉曼光谱中细胞异质性的时间发展,并测试了两种异质性分析方法。不出所料,在所有受测细胞系的两种分析中,一些可能归因于糖原的光谱峰在光谱强度变化之前正确地表现出较高的异质性。光谱数据与基于异质性的分析相结合,将成为一种不仅使用信号强度,而且使用异质性作为生物学指标的生物学方法。
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