Genetic diversity assessment of clonal plant Rosa persica in China

IF 3.5 Q3 Biochemistry, Genetics and Molecular Biology Journal of Genetic Engineering and Biotechnology Pub Date : 2024-08-23 DOI:10.1016/j.jgeb.2024.100405
{"title":"Genetic diversity assessment of clonal plant Rosa persica in China","authors":"","doi":"10.1016/j.jgeb.2024.100405","DOIUrl":null,"url":null,"abstract":"<div><p><em>Rosa persica</em> is considered a clonal plant because it is mainly propagated by clonal growth. Due to environmental degradation and habitat devastation, <em>R. persica</em> has been listed as a national second-class protected plant in China. However, the absence of research on wild populations of <em>R. persica</em> has impeded progress in formulating efficient conservation strategies. In this study, we investigated the clonal dispersal distance of <em>R. persica</em> to accurately determine the genetic diversity and population structure of the wild population in Xinjiang. We suggested that 20 m was the threshold distance with which to distinguish between different genets of plants. Based on this, we collated sequencing data from a total of 70 different genets of plants from 117 test samples. Eight populations of <em>R. persica</em> were primarily categorized into three subgroups: BL (Bole), TC (Tacheng) and CG (Changji). Of these, the CG subgroup exhibited the most genetic diversity. This research is the first to illustrates the clonal dispersal distance of <em>R. persica</em>, thus providing valuable reference guidelines for understanding the reproductive characteristics of clonal plants. In addition, the genetic diversity of <em>R. persica</em> provides a theoretical foundation for the formulation of conservation policies.</p></div>","PeriodicalId":53463,"journal":{"name":"Journal of Genetic Engineering and Biotechnology","volume":null,"pages":null},"PeriodicalIF":3.5000,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1687157X24001082/pdfft?md5=a541940c538d161e61279c6ab29318ad&pid=1-s2.0-S1687157X24001082-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Genetic Engineering and Biotechnology","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1687157X24001082","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0

Abstract

Rosa persica is considered a clonal plant because it is mainly propagated by clonal growth. Due to environmental degradation and habitat devastation, R. persica has been listed as a national second-class protected plant in China. However, the absence of research on wild populations of R. persica has impeded progress in formulating efficient conservation strategies. In this study, we investigated the clonal dispersal distance of R. persica to accurately determine the genetic diversity and population structure of the wild population in Xinjiang. We suggested that 20 m was the threshold distance with which to distinguish between different genets of plants. Based on this, we collated sequencing data from a total of 70 different genets of plants from 117 test samples. Eight populations of R. persica were primarily categorized into three subgroups: BL (Bole), TC (Tacheng) and CG (Changji). Of these, the CG subgroup exhibited the most genetic diversity. This research is the first to illustrates the clonal dispersal distance of R. persica, thus providing valuable reference guidelines for understanding the reproductive characteristics of clonal plants. In addition, the genetic diversity of R. persica provides a theoretical foundation for the formulation of conservation policies.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
中国克隆植物蔷薇的遗传多样性评估
蔷薇被认为是一种克隆植物,因为它主要通过克隆生长繁殖。由于环境退化和栖息地破坏,蔷薇已被列为中国国家二级保护植物。然而,由于缺乏对柿树野生种群的研究,阻碍了制定有效保护策略的进展。在本研究中,我们调查了柿树的克隆扩散距离,以准确确定新疆野生种群的遗传多样性和种群结构。我们认为 20 米是区分植物不同基因组的临界距离。在此基础上,我们整理了 117 个测试样本中 70 个不同基因组植物的测序数据。柿树的八个种群主要分为三个亚群:BL(博乐)、TC(塔城)和 CG(昌吉)。其中,CG 亚群的遗传多样性最高。该研究首次说明了柿树的克隆扩散距离,从而为了解克隆植株的繁殖特性提供了有价值的参考指南。此外,柿树的遗传多样性还为制定保护政策提供了理论依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Journal of Genetic Engineering and Biotechnology
Journal of Genetic Engineering and Biotechnology Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
5.70
自引率
5.70%
发文量
159
审稿时长
16 weeks
期刊介绍: Journal of genetic engineering and biotechnology is devoted to rapid publication of full-length research papers that leads to significant contribution in advancing knowledge in genetic engineering and biotechnology and provide novel perspectives in this research area. JGEB includes all major themes related to genetic engineering and recombinant DNA. The area of interest of JGEB includes but not restricted to: •Plant genetics •Animal genetics •Bacterial enzymes •Agricultural Biotechnology, •Biochemistry, •Biophysics, •Bioinformatics, •Environmental Biotechnology, •Industrial Biotechnology, •Microbial biotechnology, •Medical Biotechnology, •Bioenergy, Biosafety, •Biosecurity, •Bioethics, •GMOS, •Genomic, •Proteomic JGEB accepts
期刊最新文献
The positive implication of natural antioxidants on oxidative stress-mediated diabetes mellitus complications Opuntia ficus indica cladode extract inhibit DNA double-strand breaks and locally multiply damaged sites induced by gamma radiation Marine microalgae and their industrial biotechnological applications: A review Genetic diversity assessment of clonal plant Rosa persica in China Evaluating the anti-cancer potential and pharmacological in-sights of Physalis angulata Root Extract as a strong candidate for future research
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1