Novel Deep CNNs Explore Regions, Boundaries, and Residual Learning for COVID-19 Infection Analysis in Lung CT.

IF 2.2 4区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Tomography Pub Date : 2024-08-03 DOI:10.3390/tomography10080091
Bader Khalid Alshemaimri
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Abstract

COVID-19 poses a global health crisis, necessitating precise diagnostic methods for timely containment. However, accurately delineating COVID-19-affected regions in lung CT scans is challenging due to contrast variations and significant texture diversity. In this regard, this study introduces a novel two-stage classification and segmentation CNN approach for COVID-19 lung radiological pattern analysis. A novel Residual-BRNet is developed to integrate boundary and regional operations with residual learning, capturing key COVID-19 radiological homogeneous regions, texture variations, and structural contrast patterns in the classification stage. Subsequently, infectious CT images undergo lesion segmentation using the newly proposed RESeg segmentation CNN in the second stage. The RESeg leverages both average and max-pooling implementations to simultaneously learn region homogeneity and boundary-related patterns. Furthermore, novel pixel attention (PA) blocks are integrated into RESeg to effectively address mildly COVID-19-infected regions. The evaluation of the proposed Residual-BRNet CNN in the classification stage demonstrates promising performance metrics, achieving an accuracy of 97.97%, F1-score of 98.01%, sensitivity of 98.42%, and MCC of 96.81%. Meanwhile, PA-RESeg in the segmentation phase achieves an optimal segmentation performance with an IoU score of 98.43% and a dice similarity score of 95.96% of the lesion region. The framework's effectiveness in detecting and segmenting COVID-19 lesions highlights its potential for clinical applications.

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新型深度 CNN 探索区域、边界和残余学习,用于肺部 CT 中的 COVID-19 感染分析。
COVID-19 带来了全球性的健康危机,需要精确的诊断方法来及时遏制。然而,由于对比度的变化和纹理的显著多样性,在肺部 CT 扫描中准确划分 COVID-19 影响区域具有挑战性。为此,本研究引入了一种新颖的两阶段分类和分割 CNN 方法,用于 COVID-19 肺部放射模式分析。研究人员开发了一种新颖的残差-BRNet,将边界和区域操作与残差学习相结合,在分类阶段捕捉 COVID-19 放射学的关键同质区域、纹理变化和结构对比模式。随后,在第二阶段使用新提出的 RESeg 分割 CNN 对感染性 CT 图像进行病变分割。RESeg 利用平均和最大池化实现同时学习区域同质性和边界相关模式。此外,RESeg 中还集成了新的像素关注 (PA) 块,以有效处理轻度 COVID-19 感染区域。在分类阶段,对所提出的残差-BRNet CNN 的评估显示出了良好的性能指标,其准确率达到了 97.97%,F1 分数为 98.01%,灵敏度为 98.42%,MCC 为 96.81%。同时,PA-RESeg 在分割阶段实现了最佳分割性能,病变区域的 IoU 得分为 98.43%,骰子相似度得分为 95.96%。该框架在检测和分割 COVID-19 病变方面的有效性凸显了其在临床应用中的潜力。
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来源期刊
Tomography
Tomography Medicine-Radiology, Nuclear Medicine and Imaging
CiteScore
2.70
自引率
10.50%
发文量
222
期刊介绍: TomographyTM publishes basic (technical and pre-clinical) and clinical scientific articles which involve the advancement of imaging technologies. Tomography encompasses studies that use single or multiple imaging modalities including for example CT, US, PET, SPECT, MR and hyperpolarization technologies, as well as optical modalities (i.e. bioluminescence, photoacoustic, endomicroscopy, fiber optic imaging and optical computed tomography) in basic sciences, engineering, preclinical and clinical medicine. Tomography also welcomes studies involving exploration and refinement of contrast mechanisms and image-derived metrics within and across modalities toward the development of novel imaging probes for image-based feedback and intervention. The use of imaging in biology and medicine provides unparalleled opportunities to noninvasively interrogate tissues to obtain real-time dynamic and quantitative information required for diagnosis and response to interventions and to follow evolving pathological conditions. As multi-modal studies and the complexities of imaging technologies themselves are ever increasing to provide advanced information to scientists and clinicians. Tomography provides a unique publication venue allowing investigators the opportunity to more precisely communicate integrated findings related to the diverse and heterogeneous features associated with underlying anatomical, physiological, functional, metabolic and molecular genetic activities of normal and diseased tissue. Thus Tomography publishes peer-reviewed articles which involve the broad use of imaging of any tissue and disease type including both preclinical and clinical investigations. In addition, hardware/software along with chemical and molecular probe advances are welcome as they are deemed to significantly contribute towards the long-term goal of improving the overall impact of imaging on scientific and clinical discovery.
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