Spinocerebellar ataxia type 10 and Huntington disease-like 2 in Venezuela: Further evidence of two different ancestral founder effects

IF 1 4区 生物学 Q4 GENETICS & HEREDITY Annals of Human Genetics Pub Date : 2024-08-30 DOI:10.1111/ahg.12576
Irene Paradisi, Sergio Arias, Vassiliki Ikonomu
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Abstract

Introduction

The American continent populations have a wide genetic diversity, as a product of the admixture of three ethnic groups: Amerindian, European, and African Sub-Saharan. Spinocerebellar ataxia type 10 (SCA10) and Huntington disease-like 2 (HDL2) have very ancient ancestral origins but are restricted to two populations: Amerindian and African Sub-Saharan, respectively. This study aimed to investigate the genetic epidemiological features of these diseases in Venezuela.

Methods

In-phase haplotypes with the expanded alleles were established in seven unrelated index cases diagnosed with SCA10 and in 11 unrelated index cases diagnosed with HDL2. The origins of remote ancestors were recorded.

Results

The geographic origin of the ancestors showed grouping in clusters. SCA10 had a minimal general prevalence of 1:256,174 families in the country, but within the identified geographic clusters, the prevalence ranged from 5 per 100,000 to 43 per 100,000 families. HDL2 had a general prevalence of 1:163,016 families, however, within the clusters, the prevalence ranged from 31 per 100,000 to 60 per 100,000 families. The locus-specific haplotype shared by all families worldwide, including the Venezuelans, supports a single old ancestral origin in each case.

Conclusion

Knowing the genetic ancestry and geographic origins of patients in Ibero-American mixed populations could have significant diagnostic implications; thus, both diseases in Venezuela should always be first explored in patients with a suggestive phenotype and ancestors coming from the same known geographic clusters.

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委内瑞拉的脊髓小脑共济失调 10 型和亨廷顿病样 2:两种不同祖先奠基效应的进一步证据。
简介美洲大陆的人口具有广泛的遗传多样性,这是三个种族混合的产物:美洲印第安人、欧洲人和非洲撒哈拉以南地区人。脊髓小脑共济失调 10 型(SCA10)和亨廷顿病样 2(HDL2)的祖先起源非常古老,但仅限于两个人群:美洲印第安人和非洲撒哈拉以南地区。本研究旨在调查这些疾病在委内瑞拉的遗传流行病学特征:方法:在确诊为 SCA10 的 7 个无血缘关系指数病例和确诊为 HDL2 的 11 个无血缘关系指数病例中建立了扩增等位基因的同相单倍型。记录了远祖的来源:结果:祖先的地理来源呈现群集。SCA10在全国的普遍发病率最低,为1:256,174个家庭,但在已确定的地理集群中,发病率从每10万个家庭中5例到每10万个家庭中43例不等。HDL2 的普遍流行率为 1:163,016 个家庭,但在各集群内,流行率从每 100,000 个家庭中 31 个到每 100,000 个家庭中 60 个不等。包括委内瑞拉人在内的全球所有家庭共享的基因座特异单倍型支持每个病例的单一古老祖先起源:了解伊比利亚-美洲混血人群中患者的遗传祖先和地理起源可能会对诊断产生重大影响;因此,委内瑞拉的这两种疾病都应首先在具有提示性表型且祖先来自同一已知地理集群的患者中进行调查。
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来源期刊
Annals of Human Genetics
Annals of Human Genetics 生物-遗传学
CiteScore
4.20
自引率
0.00%
发文量
34
审稿时长
3 months
期刊介绍: Annals of Human Genetics publishes material directly concerned with human genetics or the application of scientific principles and techniques to any aspect of human inheritance. Papers that describe work on other species that may be relevant to human genetics will also be considered. Mathematical models should include examples of application to data where possible. Authors are welcome to submit Supporting Information, such as data sets or additional figures or tables, that will not be published in the print edition of the journal, but which will be viewable via the online edition and stored on the website.
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