High-resolution reconstruction of a C. elegans ribosome sheds light on evolutionary dynamics and tissue specificity.

IF 4.2 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY RNA Pub Date : 2024-10-16 DOI:10.1261/rna.080103.124
Enisha Sehgal, Chloe Wohlenberg, Evan M Soukup, Marcus J Viscardi, Vitor Hugo Balasco Serrão, Joshua A Arribere
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Abstract

Caenorhabditis elegans is an important model organism for human health and disease, with foundational contributions to the understanding of gene expression and tissue patterning in animals. An invaluable tool in modern gene expression research is the presence of a high-resolution ribosome structure, though no such structure exists for C. elegans Here, we present a high-resolution single-particle cryogenic electron microscopy (cryo-EM) reconstruction and molecular model of a C. elegans ribosome, revealing a significantly streamlined animal ribosome. Many facets of ribosome structure are conserved in C. elegans, including overall ribosomal architecture and the mechanism of cycloheximide, whereas other facets, such as expansion segments and eL28, are rapidly evolving. We identify uL5 and uL23 as two instances of tissue-specific ribosomal protein paralog expression conserved in Caenorhabditis, suggesting that C. elegans ribosomes vary across tissues. The C. elegans ribosome structure will provide a basis for future structural, biochemical, and genetic studies of translation in this important animal system.

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高分辨率重建秀丽隐杆线虫核糖体揭示了进化动态和组织特异性。
秀丽隐杆线虫是研究人类健康和疾病的重要模式生物,对了解动物的基因表达和组织形态做出了奠基性的贡献。在现代基因表达研究中,高分辨率核糖体结构是一个非常宝贵的工具,但 elegans 目前还没有这种结构。在这里,我们展示了高分辨率的单颗粒低温电子显微镜(cryoEM)重建和优雅鼠核糖体的分子模型,揭示了一个显著精简的动物核糖体。在秀丽隐杆线虫中,核糖体结构的许多方面都是保守的,包括核糖体的整体结构和环己亚胺的机制,而其他方面,如扩增段和eL28则在迅速演变。我们发现uL5和uL23是草履虫组织特异性核糖体蛋白旁系表达的两个保守实例,这表明草履虫核糖体在不同组织间存在差异。elegans 核糖体结构将为未来在这一重要动物系统中进行翻译的结构、生化和遗传研究奠定基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
RNA
RNA 生物-生化与分子生物学
CiteScore
8.30
自引率
2.20%
发文量
101
审稿时长
2.6 months
期刊介绍: RNA is a monthly journal which provides rapid publication of significant original research in all areas of RNA structure and function in eukaryotic, prokaryotic, and viral systems. It covers a broad range of subjects in RNA research, including: structural analysis by biochemical or biophysical means; mRNA structure, function and biogenesis; alternative processing: cis-acting elements and trans-acting factors; ribosome structure and function; translational control; RNA catalysis; tRNA structure, function, biogenesis and identity; RNA editing; rRNA structure, function and biogenesis; RNA transport and localization; regulatory RNAs; large and small RNP structure, function and biogenesis; viral RNA metabolism; RNA stability and turnover; in vitro evolution; and RNA chemistry.
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