The rapid-reaction kinetics of an electron-bifurcating flavoprotein, the crotonyl-CoA-dependent NADH:ferredoxin oxidoreductase EtfAB:bcd.

IF 4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biological Chemistry Pub Date : 2024-09-03 DOI:10.1016/j.jbc.2024.107745
Derek Nguyen, Wayne Vigil, Dimitri Niks, Russ Hille
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Abstract

We have investigated the kinetic behavior of the electron-bifurcating crotonyl-CoA-dependent NADH: ferredoxin oxidoreductase EtfAB:bcd from Megasphaera elsdenii. The overall behavior of the complex in both the reductive and the oxidative half-reactions is consistent with that previously determined for the individual EtfAB and bcd components. This includes an uncrossing of the half-potentials of the bifurcating flavin of the EtfAB component in the course of ferredoxin-reducing catalysis, ionization of the bcd flavin semiquinone and the appearance of a charge transfer complex upon binding of the high potential acceptor crotonyl-CoA. The observed rapid-reaction rates of ferredoxin reduction are independent of [NADH], [crotonyl-CoA], and [ferredoxin], with an observed rate of ∼0.2 s-1, consistent with the observed steady-state kinetics. In enzyme-monitored turnover experiments, an approach to steady-state where the complex's flavins become reduced but no ferredoxin is generated is followed by a steady-state phase characterized by extensive ferredoxin reduction but little change in overall levels of flavin reduction. The approach to the steady-state phase can be eliminated by prior reduction of the complex, in which case there is no lag in the onset of ferredoxin reduction; this is consistent with the et FAD needing to be reduced to the level of the (anionic) semiquinone for bifurcation and concomitant ferredoxin reduction to occur. Single-turnover experiments support this conclusion, with the accumulation of the anionic semiquinone of the et FAD apparently required to prime the system for subsequent bifurcation and ferredoxin reduction.

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电子分叉黄素蛋白--巴豆酰-CoA 依赖性 NADH:ferredoxin 氧化还原酶 EtfAB:bcd 的快速反应动力学。
我们研究了 Megasphaera elsdenii 的电子分叉巴豆酰-CoA 依赖性 NADH: ferredoxin 氧化还原酶 EtfAB:bcd 的动力学行为。该复合物在还原半反应和氧化半反应中的整体行为与之前确定的单个 EtfAB 和 bcd 成分的行为一致。这包括 EtfAB 成分的分叉黄素在铁氧还原催化过程中的半电位不交叉、bcd 黄素半醌的电离以及与高电位受体巴豆酰-CoA 结合后电荷转移复合物的出现。观察到的铁红毒素还原快速反应速率与[NADH]、[巴豆酰-CoA]和[铁红毒素]无关,观察到的速率为∼0.2 s-1,与观察到的稳态动力学一致。在酶监测翻转实验中,在接近稳态阶段,复合物的黄素开始还原,但没有铁氧还原酶生成,随后进入稳态阶段,其特点是铁氧还原酶大量还原,但黄素还原的总体水平变化不大。在这种情况下,铁氧还原的开始不会出现滞后;这与等 FAD 需要还原到(阴离子)半醌的水平才能发生分叉和同时发生铁氧还原是一致的。单次翻转实验支持了这一结论,等离子 FAD 的阴离子半醌的积累显然需要系统为随后的分叉和铁氧还原提供能量。
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Journal of Biological Chemistry
Journal of Biological Chemistry Biochemistry, Genetics and Molecular Biology-Biochemistry
自引率
4.20%
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期刊介绍: The Journal of Biological Chemistry welcomes high-quality science that seeks to elucidate the molecular and cellular basis of biological processes. Papers published in JBC can therefore fall under the umbrellas of not only biological chemistry, chemical biology, or biochemistry, but also allied disciplines such as biophysics, systems biology, RNA biology, immunology, microbiology, neurobiology, epigenetics, computational biology, ’omics, and many more. The outcome of our focus on papers that contribute novel and important mechanistic insights, rather than on a particular topic area, is that JBC is truly a melting pot for scientists across disciplines. In addition, JBC welcomes papers that describe methods that will help scientists push their biochemical inquiries forward and resources that will be of use to the research community.
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