Deep Hair Phenomics: Implications in Endocrinology, Development, and Aging.

Jasson Makkar, Jorge Flores, Mason Matich, Tommy T Duong, Sean M Thompson, Yiqing Du, Isabelle Busch, Quan M Phan, Qing Wang, Kristen Delevich, Liam Broughton-Neiswanger, Iwona M Driskell, Ryan R Driskell
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Abstract

Hair quality is an important indicator of health in humans and other animals. Current approaches to assess hair quality are generally non-quantitative or are low throughput due to technical limitations of 'splitting hairs'. We developed a deep learning-based computer vision approach for the high throughput quantification of individual hair fibers at a high resolution. Our innovative computer vision tool can distinguish and extract overlapping fibers for quantification of multivariate features including length, width, and color to generate single-hair phenomes (shPhenome) of diverse conditions across the lifespan of mice. Using our tool, we explored the effects of hormone signaling, genetic modifications, and aging on hair follicle output. Our analyses revealed hair phenotypes resultant of endocrinological, developmental, and aging-related alterations in the fur coats of mice. These results demonstrate the efficacy of our deep hair phenomics tool for characterizing factors that modulate the hair follicle and developing new diagnostic methods for detecting disease through the hair fiber. Finally, we have generated a searchable, interactive web tool for the exploration of our hair fiber data at skinregeneration.org.

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深层毛发表型组学:对内分泌学、发育和衰老的影响。
毛发质量是人类和其他动物健康的重要指标。目前评估毛发质量的方法一般都是非定量的,或者由于 "分毫不差 "的技术限制而导致通量较低。我们开发了一种基于深度学习的计算机视觉方法,以高分辨率对单根毛发纤维进行高通量量化。我们的创新型计算机视觉工具可以区分和提取重叠的毛发纤维,对包括长度、宽度和颜色在内的多变量特征进行量化,从而生成小鼠一生中不同情况下的单根毛发表型组(shPhenome)。利用我们的工具,我们探索了激素信号、基因修饰和衰老对毛囊输出的影响。我们的分析揭示了小鼠毛皮中与内分泌、发育和衰老相关的改变所导致的毛发表型。这些结果证明了我们的深度毛发表型组学工具在描述调节毛囊的因素和开发通过毛发纤维检测疾病的新诊断方法方面的功效。最后,我们在 skinregeneration.org 网站上生成了一个可搜索的交互式网络工具,用于探索我们的毛发纤维数据。
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