Renin and CYP P450 gene variations significantly associated with essential hypertension: A prospective pharmacogenomics study

IF 1 Q4 GENETICS & HEREDITY Gene Reports Pub Date : 2024-09-02 DOI:10.1016/j.genrep.2024.102023
Lakshmanan Loganathan , S. Justin Carlus , Karthikeyan Muthusamy
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Abstract

Objective

This study aims to investigate the association between Renin-angiotensin aldosterone system (RAAS) and Cytochrome P450 gene polymorphisms in hypertension patients of the South Indian population using pharmacogenomics profile.

Methods

Hypertension cases (N = 147) and control subjects (n = 150) were collected from Tamil Nadu, India. A case-control association study was conducted to assess the involvement of RAAS gene polymorphisms (REN rs397514691, REN rs544315427, REN rs567667202) and CYP gene polymorphisms (CYP2D6 rs754164689, CYP2D6 rs1058172, CYP3A4 rs765598920) in essential hypertensive patients. Genotyping was performed using the PCR-RFLP method, and significant results were validated through RT-PCR analysis.

Results

The genotype and allele distribution of REN rs397514691 and rs544315427 variants significantly associated with hypertensive patients (Variant Allele Frequency (VAF) = 0.11; VAF = 0.27, respectively). CYP2D6 polymorphisms rs754164689 and rs1058172 variant alleles were significantly associated with female hypertensive patients, suggesting a potential risk allele for essential hypertension in the South Indian population. REN and CYP3A4 variants, highly connected in pharmacology action, were validated through RT-PCR amplification studies, providing new insights into their role in the development of hypertension. Association confirmation was achieved through multifactor dimensionality reduction analysis.

Conclusion

The genes associated with specific variants, particularly REN and CYP2D6, may serve as potential markers for the early diagnosis of hypertension and as new drug targets, particularly in the female population.

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肾素和 CYP P450 基因变异与本质性高血压密切相关:前瞻性药物基因组学研究
方法从印度泰米尔纳德邦收集高血压病例(147 例)和对照受试者(150 例)。研究人员进行了一项病例对照关联研究,以评估 RAAS 基因多态性(REN rs397514691、REN rs544315427、REN rs567667202)和 CYP 基因多态性(CYP2D6 rs754164689、CYP2D6 rs1058172、CYP3A4 rs765598920)对本质型高血压患者的影响。结果 REN rs397514691 和 rs544315427 变体的基因型和等位基因分布与高血压患者显著相关(变体等位基因频率(VAF)= 0.11;VAF = 0.27)。CYP2D6 多态性 rs754164689 和 rs1058172 变异等位基因与女性高血压患者明显相关,表明在南印度人群中存在潜在的本质性高血压风险等位基因。REN和CYP3A4变异在药理作用上具有高度关联性,通过RT-PCR扩增研究对这两个变异进行了验证,为了解它们在高血压发病中的作用提供了新的视角。结论与特定变异相关的基因,尤其是 REN 和 CYP2D6,可作为高血压早期诊断的潜在标记物和新的药物靶点,尤其是在女性人群中。
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来源期刊
Gene Reports
Gene Reports Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.30
自引率
7.70%
发文量
246
审稿时长
49 days
期刊介绍: Gene Reports publishes papers that focus on the regulation, expression, function and evolution of genes in all biological contexts, including all prokaryotic and eukaryotic organisms, as well as viruses. Gene Reports strives to be a very diverse journal and topics in all fields will be considered for publication. Although not limited to the following, some general topics include: DNA Organization, Replication & Evolution -Focus on genomic DNA (chromosomal organization, comparative genomics, DNA replication, DNA repair, mobile DNA, mitochondrial DNA, chloroplast DNA). Expression & Function - Focus on functional RNAs (microRNAs, tRNAs, rRNAs, mRNA splicing, alternative polyadenylation) Regulation - Focus on processes that mediate gene-read out (epigenetics, chromatin, histone code, transcription, translation, protein degradation). Cell Signaling - Focus on mechanisms that control information flow into the nucleus to control gene expression (kinase and phosphatase pathways controlled by extra-cellular ligands, Wnt, Notch, TGFbeta/BMPs, FGFs, IGFs etc.) Profiling of gene expression and genetic variation - Focus on high throughput approaches (e.g., DeepSeq, ChIP-Seq, Affymetrix microarrays, proteomics) that define gene regulatory circuitry, molecular pathways and protein/protein networks. Genetics - Focus on development in model organisms (e.g., mouse, frog, fruit fly, worm), human genetic variation, population genetics, as well as agricultural and veterinary genetics. Molecular Pathology & Regenerative Medicine - Focus on the deregulation of molecular processes in human diseases and mechanisms supporting regeneration of tissues through pluripotent or multipotent stem cells.
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