Shaine Chenxin Bao, Dalia Mizikovsky, Kathleen Pishas, Qiongyi Zhao, Karla J Cowley, Evanny Marinovic, Mark Carey, Ian Campbell, Kaylene J Simpson, Dane Cheasley, Nathan Palpant
{"title":"A robust unsupervised clustering approach for high-dimensional biological imaging data reveals shared drug-induced morphological signatures","authors":"Shaine Chenxin Bao, Dalia Mizikovsky, Kathleen Pishas, Qiongyi Zhao, Karla J Cowley, Evanny Marinovic, Mark Carey, Ian Campbell, Kaylene J Simpson, Dane Cheasley, Nathan Palpant","doi":"10.1101/2024.09.05.611300","DOIUrl":null,"url":null,"abstract":"High-throughput analysis methods have emerged as central technologies to accelerate discovery through scalable generation of large-scale data. Analysis of these datasets remains challenging due to limitations in computational approaches for dimensionality reduction. Here, we present UnTANGLeD, a versatile computational pipeline that prioritises biologically robust and meaningful information to guide actionable strategies from input screening data which we demonstrate using results from image-based drug screening. By providing a robust framework for analysing high dimensional biological data, UnTANGLeD offers a powerful tool for analysis of theoretically any data type from any screening platform.","PeriodicalId":501307,"journal":{"name":"bioRxiv - Bioinformatics","volume":"416 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"bioRxiv - Bioinformatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1101/2024.09.05.611300","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
High-throughput analysis methods have emerged as central technologies to accelerate discovery through scalable generation of large-scale data. Analysis of these datasets remains challenging due to limitations in computational approaches for dimensionality reduction. Here, we present UnTANGLeD, a versatile computational pipeline that prioritises biologically robust and meaningful information to guide actionable strategies from input screening data which we demonstrate using results from image-based drug screening. By providing a robust framework for analysing high dimensional biological data, UnTANGLeD offers a powerful tool for analysis of theoretically any data type from any screening platform.