William Duncan, Fernando Antoneli, Janet Best, Martin Golubitsky, Jiaxin Jin, H. Frederik Nijhout, Mike Reed, Ian Stewart
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引用次数: 0
Abstract
SIAM Journal on Applied Dynamical Systems, Volume 23, Issue 3, Page 2262-2292, September 2024. Abstract.Homeostasis is a regulatory mechanism that keeps a specific variable close to a set value as other variables fluctuate. The notion of homeostasis can be rigorously formulated when the model of interest is represented as an input-output network, with distinguished input and output nodes, and the dynamics of the network determines the corresponding input-output function of the system. In this context, homeostasis can be defined as an “infinitesimal” notion, namely, the derivative of the input-output function is zero at an isolated point. Combining this approach with graph-theoretic ideas from combinatorial matrix theory provides a systematic framework for calculating homeostasis points in models and classifying the different homeostasis types in input-output networks. In this paper we extend this theory by introducing the notion of a homeostasis pattern, defined as a set of nodes, in addition to the output node, that are simultaneously infinitesimally homeostatic. We prove that each homeostasis type leads to a distinct homeostasis pattern. Moreover, we describe all homeostasis patterns supported by a given input-output network in terms of a combinatorial structure associated to the input-output network. We call this structure the homeostasis pattern network.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.