Cytogenetic analysis and visualization of genetic relationships in wild lilies

IF 1.6 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Genes & genomics Pub Date : 2024-09-11 DOI:10.1007/s13258-024-01568-w
Ji-Yun Kang, Ki-Byung Lim, Yun-Jae Ahn
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Abstract

Lilies are highly regarded for their ornamental appeal and striking flowers, which are of significant importance in horticulture. Understanding the genetic makeup of these plants is crucial for breeding and developing new cultivars. This study presents a comprehensive cytogenetic analysis of 45 S and 5 S rDNA loci in 34 wild Lilium species. To reveal the genetic relationships within the genus, advanced visualization methods, such as heatmaps and 3D network plots, were utilized. The results of this study identified both conserved and divergent genetic features, which offer insights into the evolutionary history and potential genetic compatibility of these species. Notably, the clustering of species based on rDNA locus patterns highlights the need for potential taxonomic re-evaluation and reveals candidates for cross-breeding. This integrated approach emphasizes the importance of combining cytogenetic data with traditional morphological classifications to refine our understanding of the Lilium species. Future research should expand the range of analyzed species, incorporate additional molecular markers to further elucidate genetic relationships, and support the development of resilient and diverse ornamental crops. The findings of this study provide a novel framework for genetic analysis of Lilium, offering valuable insights for both scientific understanding and practical breeding programs.

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野生百合的细胞遗传分析和遗传关系可视化
百合因其观赏性和引人注目的花朵而备受推崇,在园艺领域具有重要意义。了解这些植物的基因构成对于培育和开发新的栽培品种至关重要。本研究对 34 种野生百合的 45 个 S 和 5 个 S rDNA 位点进行了全面的细胞遗传学分析。为了揭示百合属内部的遗传关系,研究人员采用了热图和三维网络图等先进的可视化方法。研究结果发现了这些物种既有保守的遗传特征,也有差异的遗传特征,从而揭示了这些物种的进化历史和潜在的遗传兼容性。值得注意的是,根据 rDNA 位点模式对物种进行的聚类突显了对潜在分类学重新评估的需求,并揭示了杂交育种的候选物种。这种综合方法强调了将细胞遗传学数据与传统形态学分类相结合以完善我们对百合科物种认识的重要性。未来的研究应扩大分析物种的范围,纳入更多的分子标记以进一步阐明遗传关系,并支持发展具有抗逆性和多样性的观赏作物。本研究的发现为百合的遗传分析提供了一个新的框架,为科学认识和实际育种计划提供了宝贵的见解。
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来源期刊
Genes & genomics
Genes & genomics 生物-生化与分子生物学
CiteScore
3.70
自引率
4.80%
发文量
131
审稿时长
6-12 weeks
期刊介绍: Genes & Genomics is an official journal of the Korean Genetics Society (http://kgenetics.or.kr/). Although it is an official publication of the Genetics Society of Korea, membership of the Society is not required for contributors. It is a peer-reviewed international journal publishing print (ISSN 1976-9571) and online version (E-ISSN 2092-9293). It covers all disciplines of genetics and genomics from prokaryotes to eukaryotes from fundamental heredity to molecular aspects. The articles can be reviews, research articles, and short communications.
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