Heejong Kim, Leo Milecki, Mina C Moghadam, Fengbei Liu, Minh Nguyen, Eric Qiu, Abhishek Thanki, Mert R Sabuncu
{"title":"Effective Segmentation of Post-Treatment Gliomas Using Simple Approaches: Artificial Sequence Generation and Ensemble Models","authors":"Heejong Kim, Leo Milecki, Mina C Moghadam, Fengbei Liu, Minh Nguyen, Eric Qiu, Abhishek Thanki, Mert R Sabuncu","doi":"arxiv-2409.08143","DOIUrl":null,"url":null,"abstract":"Segmentation is a crucial task in the medical imaging field and is often an\nimportant primary step or even a prerequisite to the analysis of medical\nvolumes. Yet treatments such as surgery complicate the accurate delineation of\nregions of interest. The BraTS Post-Treatment 2024 Challenge published the\nfirst public dataset for post-surgery glioma segmentation and addresses the\naforementioned issue by fostering the development of automated segmentation\ntools for glioma in MRI data. In this effort, we propose two straightforward\napproaches to enhance the segmentation performances of deep learning-based\nmethodologies. First, we incorporate an additional input based on a simple\nlinear combination of the available MRI sequences input, which highlights\nenhancing tumors. Second, we employ various ensembling methods to weigh the\ncontribution of a battery of models. Our results demonstrate that these\napproaches significantly improve segmentation performance compared to baseline\nmodels, underscoring the effectiveness of these simple approaches in improving\nmedical image segmentation tasks.","PeriodicalId":501289,"journal":{"name":"arXiv - EE - Image and Video Processing","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - EE - Image and Video Processing","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2409.08143","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Segmentation is a crucial task in the medical imaging field and is often an
important primary step or even a prerequisite to the analysis of medical
volumes. Yet treatments such as surgery complicate the accurate delineation of
regions of interest. The BraTS Post-Treatment 2024 Challenge published the
first public dataset for post-surgery glioma segmentation and addresses the
aforementioned issue by fostering the development of automated segmentation
tools for glioma in MRI data. In this effort, we propose two straightforward
approaches to enhance the segmentation performances of deep learning-based
methodologies. First, we incorporate an additional input based on a simple
linear combination of the available MRI sequences input, which highlights
enhancing tumors. Second, we employ various ensembling methods to weigh the
contribution of a battery of models. Our results demonstrate that these
approaches significantly improve segmentation performance compared to baseline
models, underscoring the effectiveness of these simple approaches in improving
medical image segmentation tasks.