Water-saving GC-MC model captures temporally differential enzymatic and transporter activities during C3-CAM transition

Devlina Sarkar, Sudip Kundu
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Abstract

CAM (Crassulacean Acid Metabolism) plants reduce the water loss through transpiration in arid environments (Wickell et al., 2021), using an alternative pathway of carbon assimilation. To ensure food security, engineering CAM into C3 plants can be achieved by inverting the stomatal rhythm and the timing of major CO2 uptake from day to night. Identification of the metabolic enzymes and intra-cellular transporters, present in both C3 and CAM but having different differential temporal activities throughout the diel cycle (Yang et al., 2015; Heyduk et al., 2019) and quantitative estimations of the flux distributions along the biochemical trajectory of C3-to-CAM transition may help us to achieve the goal. Here, we simulate a constraint-based combined metabolic model of guard cell (GC) and mesophyll cell (MC), linking temporal fluctuations of temperature (T) and relative humidity (RH) throughout the diurnal cycle with osmolyte accumulation dependent stomatal opening, CO2 uptake and transpirational water loss. Starting with C3 metabolism, gradual increase in water-use efficiency (WUE) captures several known and new differential activities of metabolic enzymes, transporters, sugar-malate cycle etc. in GC and MC during C3-to-CAM transition.
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节水型 GC-MC 模型捕捉到 C3-CAM 转换过程中酶和转运体活动的时间差异
CAM(腐殖酸代谢)植物利用碳同化的替代途径,减少了干旱环境中通过蒸腾作用流失的水分(Wickell 等人,2021 年)。为确保粮食安全,可通过颠倒气孔节律和昼夜主要二氧化碳吸收时间,将 CAM 工程应用于 C3 植物。鉴定同时存在于 C3 和 CAM 中、但在整个昼夜周期中具有不同时间活动的代谢酶和细胞内转运体(Yang 等人,2015 年;Heyduk 等人,2019 年),以及定量估计 C3 向 CAM 转化的生化轨迹上的通量分布,可能有助于我们实现这一目标。在此,我们模拟了一个基于约束的保卫细胞(GC)和叶肉细胞(MC)组合代谢模型,将整个昼夜周期的温度(T)和相对湿度(RH)的时间波动与依赖于气孔开放的渗透溶质积累、二氧化碳吸收和蒸腾失水联系起来。从 C3 新陈代谢开始,水分利用效率(WUE)的逐步提高捕捉到了 C3 向 CAM 过渡期间 GC 和 MC 中代谢酶、转运体、糖-苹果酸循环等已知的和新的差异活动。
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