A model for contractile stress fibers embedded in bulk actomyosin networks

Mariya Savinov, Charles S. Peskin, Alex Mogilner
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Abstract

Contractile cytoskeletal structures such as fine actomyosin meshworks and stress fibers are essential force-generators for mechanical phenomena in live cells, including motility, morphogenesis, and mechanosensing. While there have been many studies on the rheology and assembly of individual stress fibers, few mathematical models have explicitly modeled the bulk actomyosin network in which stress fibers are embedded, particularly not in the case of high actin turnover. Generally the extent of the interplay between embedded stress fibers and contractile bulk networks is still not well understood. To address this gap, we design a model of stress fibers embedded in bulk actomyosin networks which utilizes the immersed boundary method, allowing one to consider various stress fiber rheologies in the context of an approximately viscous, compressible, contractile bulk network. We characterize the dynamics of bulk actomyosin networks with and without embedded stress fibers, and simulate a laser ablation experiment to demonstrate the effective long-range interactions between stress fibers as well as how perturbations of stress fibers can result in symmetry breaking of the bulk actomyosin network.
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嵌入大量肌动蛋白网络的收缩应力纤维模型
收缩细胞骨架结构(如精细肌动蛋白网状结构和应力纤维)是活细胞中机械现象(包括运动、形态发生和机械传感)必不可少的力发生器。虽然已有许多关于单个应力纤维的流变学和组装的研究,但很少有数学模型能明确地模拟应力纤维所嵌入的大量肌动蛋白网络,尤其是在高肌动蛋白周转率的情况下。一般来说,人们对嵌入的应力纤维与收缩大分子网络之间的相互作用程度仍不甚了解。为了弥补这一空白,我们设计了一个应力纤维嵌入体肌球蛋白网络的模型,该模型利用沉浸边界法,允许我们在近似粘性、可压缩、收缩性体网络的背景下考虑各种应力纤维流变学。我们描述了嵌入和未嵌入应力纤维的大块肌动蛋白网络的动力学特征,并模拟了激光烧蚀实验,以证明应力纤维之间有效的长程相互作用,以及应力纤维的扰动如何导致大块肌动蛋白网络的对称性破坏。
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