Supramolecular X-ray and Quantum Chemical Analysis of 4-(2-amino-2-oxoethyl) phenyl 4-methylbenzenesulfonate: A Tosyl Ester Derivative

IF 0.4 4区 化学 Q4 CRYSTALLOGRAPHY Journal of Chemical Crystallography Pub Date : 2024-08-17 DOI:10.1007/s10870-024-01027-0
Daljeet Singh, Ruchika Sharma, Anil Nikam, Jagannath Jadhav, Sagar Sankpal, Saminathan Murugavel, Rajni Kant
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Abstract

4-(2-amino-2-oxoethyl) phenyl 4-methylbenzenesulfonate (APMBS), a novel compound, has been synthesized and characterized by spectro-analytical techniques. X-ray diffraction data reveals it crystallizes in the triclinic crystal system with space group \(P\overline{1}\). The structure is stabilized through strong N–H⋯O, weak C–H⋯O and C–H⋯π hydrogen bond interactions yielding a supramolecular structure. The N1A–H1AA⋯O4A, C4–H4⋯O3, and C14–H14⋯Cg1 (Ring: C8–C13) interactions link the molecules into dimers, while the interaction C9-H9–O2 results in the formation of a molecular chain along the a-axis. The optimized structural geometry, by and large, as calculated using DFT and HF techniques is in conformity with the corresponding X-ray data. The DFT computation further aid in the follow up investigations including frontier molecular orbitals (FMOs), density of states (DOS), atomic charges, and molecular electrostatic potential surface (MEP). For a comprehensive description of various molecular intersections, Hirsheld surface and fingerprint plots analysis has been reported, besides the combined atoms-in-molecules (QTAIM) and reduced density gradient (RDG) analysis. Docking studies have been performed against the target protein Tubulin-Colchicine: Stathmin-Like Domain Complex.

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4-(2-氨基-2-氧代乙基)苯基 4-甲基苯磺酸酯的超分子 X 射线和量子化学分析:对甲苯磺酸酯衍生物
我们合成了一种新型化合物--4-(2-氨基-2-氧代乙基)苯基 4-甲基苯磺酸酯(APMBS),并利用光谱分析技术对其进行了表征。X 射线衍射数据显示,它结晶于空间群为 \(P\overline{1}\) 的三菱晶系。该结构通过强 N-H⋯O、弱 C-H⋯O 和 C-H⋯π 氢键相互作用而稳定,形成超分子结构。N1A-H1AA⋯O4A、C4-H4⋯O3 和 C14-H14⋯Cg1 (环:C8-C13)相互作用将分子连接成二聚体,而 C9-H9-O2 作用则导致沿 a 轴形成分子链。使用 DFT 和高频技术计算出的优化结构几何形状与相应的 X 射线数据基本一致。DFT 计算还有助于后续研究,包括前沿分子轨道 (FMO)、状态密度 (DOS)、原子电荷和分子静电位面 (MEP)。为了全面描述各种分子交叉点,除了结合原子-分子(QTAIM)和还原密度梯度(RDG)分析外,还报告了赫氏表面和指纹图谱分析。针对目标蛋白质 Tubulin-Colchicine:Stathmin-Like Domain Complex.Graphical Abstract
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来源期刊
CiteScore
1.50
自引率
12.50%
发文量
56
审稿时长
6.3 months
期刊介绍: Journal of Chemical Crystallography is an international and interdisciplinary publication dedicated to the rapid dissemination of research results in the general areas of crystallography and spectroscopy. Timely research reports detail topics in crystal chemistry and physics and their relation to problems of molecular structure; structural studies of solids, liquids, gases, and solutions involving spectroscopic, spectrometric, X-ray, and electron and neutron diffraction; and theoretical studies.
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