Prediction of fetal brain gestational age using multihead attention with Xception

IF 7 2区 医学 Q1 BIOLOGY Computers in biology and medicine Pub Date : 2024-09-14 DOI:10.1016/j.compbiomed.2024.109155
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Abstract

Accurate gestational age (GA) prediction is crucial for monitoring fetal development and ensuring optimal prenatal care. Traditional methods often face challenges in terms of precision and prediction efficiency. In this context, leveraging modern deep learning (DL) techniques is a promising solution. This paper introduces a novel DL approach for GA prediction using fetal brain images obtained via magnetic resonance imaging (MRI), which combines the strength of the Xception pretrained model with a multihead attention (MHA) mechanism. The proposed model was trained on a diverse dataset comprising 52,900 fetal brain images from 741 patients. The images encompass a GA ranging from 19 to 39 weeks. These pretrained models served as feature extraction components during the training process. The extracted features were subsequently used as the inputs of different configurable MHAs, which produced GA predictions in days. The proposed model achieved promising results with 8 attention heads, 32 dimensionality of the key space and 32 dimensionality of the value space, with an R-squared (R2) value of 96.5 %, a mean absolute error (MAE) of 3.80 days, and a Pearson correlation coefficient (PCC) of 98.50 % for the test set. Additionally, the 5-fold cross-validation results reinforce the model's reliability, with an average R2 of 95.94 %, an MAE of 3.61 days, and a PCC of 98.02 %. The proposed model excels in different anatomical views, notably the axial and sagittal views. A comparative analysis of multiple planes and a single plane highlights the effectiveness of the proposed model against other state-of-the-art (SOTA) models reported in the literature. The proposed model could help clinicians accurately predict GA.

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利用多头注意力和 Xception 预测胎儿脑部胎龄
准确预测胎龄(GA)对于监测胎儿发育和确保最佳产前护理至关重要。传统方法往往在精度和预测效率方面面临挑战。在这种情况下,利用现代深度学习(DL)技术是一种很有前景的解决方案。本文介绍了一种利用通过磁共振成像(MRI)获得的胎儿大脑图像进行 GA 预测的新型 DL 方法,该方法将 Xception 预训练模型的优势与多头注意力(MHA)机制相结合。所提出的模型在一个多样化的数据集上进行了训练,该数据集由来自 741 名患者的 52,900 张胎儿大脑图像组成。这些图像包含从 19 周到 39 周的 GA。这些预训练模型在训练过程中充当特征提取组件。提取的特征随后被用作不同可配置 MHA 的输入,从而在数天内产生 GA 预测结果。在 8 个注意力头、32 个关键空间维度和 32 个价值空间维度的情况下,所提出的模型取得了可喜的成果,测试集的 R 平方 (R2) 值为 96.5%,平均绝对误差 (MAE) 为 3.80 天,皮尔逊相关系数 (PCC) 为 98.50%。此外,5 倍交叉验证结果加强了模型的可靠性,平均 R2 值为 95.94 %,平均绝对误差为 3.61 天,PCC 为 98.02 %。提出的模型在不同的解剖视图中表现出色,尤其是轴向和矢状视图。多平面和单平面的对比分析凸显了所提模型与文献报道的其他最先进(SOTA)模型相比的有效性。所提出的模型可以帮助临床医生准确预测 GA。
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来源期刊
Computers in biology and medicine
Computers in biology and medicine 工程技术-工程:生物医学
CiteScore
11.70
自引率
10.40%
发文量
1086
审稿时长
74 days
期刊介绍: Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.
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