DrugMAP 2.0: molecular atlas and pharma-information of all drugs

IF 16.6 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Nucleic Acids Research Pub Date : 2024-09-14 DOI:10.1093/nar/gkae791
Fengcheng Li, Minjie Mou, Xiaoyi Li, Weize Xu, Jiayi Yin, Yang Zhang, Feng Zhu
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Abstract

The escalating costs and high failure rates have decelerated the pace of drug development, which amplifies the research interests in developing combinatorial/repurposed drugs and understanding off-target adverse drug reaction (ADR). In other words, it is demanded to delineate the molecular atlas and pharma-information for the combinatorial/repurposed drugs and off-target interactions. However, such invaluable data were inadequately covered by existing databases. In this study, a major update was thus conducted to the DrugMAP, which accumulated (a) 20831 combinatorial drugs and their interacting atlas involving 1583 pharmacologically important molecules; (b) 842 repurposed drugs and their interacting atlas with 795 molecules; (c) 3260 off-targets relevant to the ADRs of 2731 drugs and (d) various types of pharmaceutical information, including diverse ADMET properties, versatile diseases, and various ADRs/off-targets. With the growing demands for discovering combinatorial/repurposed therapies and the rapidly emerging interest in AI-based drug discovery, DrugMAP was highly expected to act as an indispensable supplement to existing databases facilitating drug discovery, which was accessible at: https://idrblab.org/drugmap/.
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DrugMAP 2.0:所有药物的分子图谱和制药信息
不断攀升的成本和居高不下的失败率使药物开发的步伐放缓,这进一步激发了人们对开发组合药物/再利用药物以及了解非靶向药物不良反应(ADR)的研究兴趣。换句话说,需要为组合药物/再利用药物和非靶点相互作用绘制分子图谱和制药信息。然而,现有数据库并未充分涵盖这些宝贵数据。因此,本研究对 DrugMAP 进行了重大更新,积累了:(a)20831 种组合药物及其相互作用图谱,涉及 1583 个重要药理分子;(b)842 种再利用药物及其相互作用图谱,涉及 795 个分子;(c)与 2731 种药物的 ADRs 相关的 3260 个非靶点;以及(d)各种类型的制药信息,包括各种 ADMET 特性、多种疾病和各种 ADRs/非靶点。随着发现组合疗法/再利用疗法的需求日益增长,以及人们对基于人工智能的药物发现的兴趣迅速升温,DrugMAP 被寄予厚望,将成为现有药物发现数据库不可或缺的补充,该数据库的网址为:https://idrblab.org/drugmap/。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Nucleic Acids Research
Nucleic Acids Research 生物-生化与分子生物学
CiteScore
27.10
自引率
4.70%
发文量
1057
审稿时长
2 months
期刊介绍: Nucleic Acids Research (NAR) is a scientific journal that publishes research on various aspects of nucleic acids and proteins involved in nucleic acid metabolism and interactions. It covers areas such as chemistry and synthetic biology, computational biology, gene regulation, chromatin and epigenetics, genome integrity, repair and replication, genomics, molecular biology, nucleic acid enzymes, RNA, and structural biology. The journal also includes a Survey and Summary section for brief reviews. Additionally, each year, the first issue is dedicated to biological databases, and an issue in July focuses on web-based software resources for the biological community. Nucleic Acids Research is indexed by several services including Abstracts on Hygiene and Communicable Diseases, Animal Breeding Abstracts, Agricultural Engineering Abstracts, Agbiotech News and Information, BIOSIS Previews, CAB Abstracts, and EMBASE.
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