Epigenetic regulation of the human GDAP1 gene

IF 2.3 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemistry and Biophysics Reports Pub Date : 2024-09-19 DOI:10.1016/j.bbrep.2024.101827
Kaja Karaś, Joanna Pastwińska, Anna Sałkowska, Iwona Karwaciak, Marcin Ratajewski
{"title":"Epigenetic regulation of the human GDAP1 gene","authors":"Kaja Karaś,&nbsp;Joanna Pastwińska,&nbsp;Anna Sałkowska,&nbsp;Iwona Karwaciak,&nbsp;Marcin Ratajewski","doi":"10.1016/j.bbrep.2024.101827","DOIUrl":null,"url":null,"abstract":"<div><p>Mutations in the ganglioside-induced differentiation-associated protein 1 (<em>GDAP1</em>) gene are linked to Charcot–Marie–Tooth (CMT) disease, a hereditary neurodegenerative condition. The protein encoded by this gene is involved in mitochondrial fission and calcium homeostasis. Recently, GDAP1 has also been implicated in the survival of patients with certain cancers. Despite its significant role in specific cellular processes and associated diseases, the mechanisms regulating <em>GDAP1</em> expression are largely unknown. Here, we show for the first time that methylation of the CpG island in the proximal promoter of the <em>GDAP1</em> gene inhibits its activity. Treating cells with low <em>GDAP1</em> expression using methyltransferase and HDAC inhibitors induced the expression of this gene and its encoded protein. This induction was associated with promoter demethylation and increased association of acetylated histones with the <em>GDAP1</em> promoter. Thus, we identified a mechanism that could be used to manipulate <em>GDAP1</em> expression.</p></div>","PeriodicalId":8771,"journal":{"name":"Biochemistry and Biophysics Reports","volume":"40 ","pages":"Article 101827"},"PeriodicalIF":2.3000,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2405580824001912/pdfft?md5=f9fd08807cb4fb17253e8d0588917795&pid=1-s2.0-S2405580824001912-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemistry and Biophysics Reports","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2405580824001912","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Mutations in the ganglioside-induced differentiation-associated protein 1 (GDAP1) gene are linked to Charcot–Marie–Tooth (CMT) disease, a hereditary neurodegenerative condition. The protein encoded by this gene is involved in mitochondrial fission and calcium homeostasis. Recently, GDAP1 has also been implicated in the survival of patients with certain cancers. Despite its significant role in specific cellular processes and associated diseases, the mechanisms regulating GDAP1 expression are largely unknown. Here, we show for the first time that methylation of the CpG island in the proximal promoter of the GDAP1 gene inhibits its activity. Treating cells with low GDAP1 expression using methyltransferase and HDAC inhibitors induced the expression of this gene and its encoded protein. This induction was associated with promoter demethylation and increased association of acetylated histones with the GDAP1 promoter. Thus, we identified a mechanism that could be used to manipulate GDAP1 expression.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
人类 GDAP1 基因的表观遗传调控
神经节苷脂诱导分化相关蛋白 1(GDAP1)基因突变与夏科-玛丽-牙(CMT)病(一种遗传性神经退行性疾病)有关。该基因编码的蛋白质参与线粒体分裂和钙平衡。最近,GDAP1 还与某些癌症患者的存活率有关。尽管 GDAP1 在特定细胞过程和相关疾病中发挥着重要作用,但其表达调控机制在很大程度上仍不为人所知。在这里,我们首次发现 GDAP1 基因近端启动子 CpG 岛的甲基化会抑制其活性。使用甲基转移酶和 HDAC 抑制剂处理 GDAP1 低表达的细胞,可诱导该基因及其编码蛋白的表达。这种诱导与启动子去甲基化和乙酰化组蛋白与 GDAP1 启动子的结合增加有关。因此,我们发现了一种可用于操纵 GDAP1 表达的机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Biochemistry and Biophysics Reports
Biochemistry and Biophysics Reports Biochemistry, Genetics and Molecular Biology-Biophysics
CiteScore
4.60
自引率
0.00%
发文量
191
审稿时长
59 days
期刊介绍: Open access, online only, peer-reviewed international journal in the Life Sciences, established in 2014 Biochemistry and Biophysics Reports (BB Reports) publishes original research in all aspects of Biochemistry, Biophysics and related areas like Molecular and Cell Biology. BB Reports welcomes solid though more preliminary, descriptive and small scale results if they have the potential to stimulate and/or contribute to future research, leading to new insights or hypothesis. Primary criteria for acceptance is that the work is original, scientifically and technically sound and provides valuable knowledge to life sciences research. We strongly believe all results deserve to be published and documented for the advancement of science. BB Reports specifically appreciates receiving reports on: Negative results, Replication studies, Reanalysis of previous datasets.
期刊最新文献
Application of liposomal nanoparticles of berberine in photodynamic therapy of A549 lung cancer spheroids NOS3 regulates angiogenic potential of human induced pluripotent stem cell-derived endothelial cells StarD5 modulates B cell cholesterol synthesis and IgG1 plasma cell differentiation Molecular dynamics studies reveal the structural impacts of LRRK2 R1441C and LRRK2 D1994A mutations in Parkinson's disease An immortalized adipose-derived stem cells line from the PIK3CA-related overgrowth spectrum: Unveiling novel therapeutic targets
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1