Characterization of a marine endolysin LysVPB against Vibrio parahaemolyticus

IF 1.4 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS Protein expression and purification Pub Date : 2024-09-16 DOI:10.1016/j.pep.2024.106608
Juan Chen , Ziyun Zhao , Xiaofeng Mu , Mengxin Wang , Jun Tang , Qingqing Bi
{"title":"Characterization of a marine endolysin LysVPB against Vibrio parahaemolyticus","authors":"Juan Chen ,&nbsp;Ziyun Zhao ,&nbsp;Xiaofeng Mu ,&nbsp;Mengxin Wang ,&nbsp;Jun Tang ,&nbsp;Qingqing Bi","doi":"10.1016/j.pep.2024.106608","DOIUrl":null,"url":null,"abstract":"<div><p>Currently, there is an urgent to develop safe and environmentally friendly alternatives to antibiotics for combating <em>Vibrio parahaemolyticus</em>. Endolysins are considered promising antibacterial agents due to their desirable range of action and ability to deal with antibiotic-resistant bacteria. While numerous <em>Vibrio</em> phages have been identified, the research on their endolysins is still in its infancy. In this study, a novel endolysin called LysVPB was cloned and expressed in <em>Pichia pastoris</em>. Phylogenetic analysis revealed that LysVPB bears little resemblance to other known endolysins, highlighting its unique nature. Homology modeling identified a putative calcium-binding site in LysVPB. The recombinant LysVPB achieved a lytic activity of 64.8 U/mL and had a molecular weight of approximately 17 kDa. LysVPB exhibited enhanced efficacy at pH 9.0, with 60 % of its maximum activity observed within the broad pH range of 6.0–10.0. The catalytic efficiency of LysVPB peaked at 30 °C but significantly declined beyond 50 °C. Ba<sup>2+</sup>, Co<sup>2+</sup>, and Cu<sup>2+</sup> showed inhibitory effects on the activity of LysVPB, while Ca<sup>2+</sup> can boost it to 126.8 %. Furthermore, LysVPB exhibited satisfactory efficacy against strains of <em>V. parahaemolyticus</em>. LysVPB is an innovative phage lysin with good characteristics that are specific to certain hosts. The modular nature of LysVPB allows for efficient domain exchange with alternative lysins as antimicrobial components and fusion with antimicrobial peptides. This opens up possibilities for engineering chimeric lysins in a broader range of target hosts with high antimicrobial effectiveness and strong activity under physiological conditions.</p></div>","PeriodicalId":20757,"journal":{"name":"Protein expression and purification","volume":"226 ","pages":"Article 106608"},"PeriodicalIF":1.4000,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Protein expression and purification","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1046592824001803","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0

Abstract

Currently, there is an urgent to develop safe and environmentally friendly alternatives to antibiotics for combating Vibrio parahaemolyticus. Endolysins are considered promising antibacterial agents due to their desirable range of action and ability to deal with antibiotic-resistant bacteria. While numerous Vibrio phages have been identified, the research on their endolysins is still in its infancy. In this study, a novel endolysin called LysVPB was cloned and expressed in Pichia pastoris. Phylogenetic analysis revealed that LysVPB bears little resemblance to other known endolysins, highlighting its unique nature. Homology modeling identified a putative calcium-binding site in LysVPB. The recombinant LysVPB achieved a lytic activity of 64.8 U/mL and had a molecular weight of approximately 17 kDa. LysVPB exhibited enhanced efficacy at pH 9.0, with 60 % of its maximum activity observed within the broad pH range of 6.0–10.0. The catalytic efficiency of LysVPB peaked at 30 °C but significantly declined beyond 50 °C. Ba2+, Co2+, and Cu2+ showed inhibitory effects on the activity of LysVPB, while Ca2+ can boost it to 126.8 %. Furthermore, LysVPB exhibited satisfactory efficacy against strains of V. parahaemolyticus. LysVPB is an innovative phage lysin with good characteristics that are specific to certain hosts. The modular nature of LysVPB allows for efficient domain exchange with alternative lysins as antimicrobial components and fusion with antimicrobial peptides. This opens up possibilities for engineering chimeric lysins in a broader range of target hosts with high antimicrobial effectiveness and strong activity under physiological conditions.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
抗副溶血性弧菌的海洋内溶菌素 LysVPB 的特征
目前,人们急需开发安全、环保的抗生素替代品来对付副溶血性弧菌。内溶酶因具有理想的作用范围和对付抗生素耐药菌的能力,被认为是很有前途的抗菌剂。虽然已经发现了许多弧菌噬菌体,但对其内溶素的研究仍处于起步阶段。本研究克隆了一种名为 LysVPB 的新型内溶酶,并在 Pichia pastoris 中进行了表达。系统进化分析表明,LysVPB 与其他已知的内溶酶几乎没有相似之处,这突显了它的独特性。同源建模确定了 LysVPB 中的一个假定钙结合位点。重组 LysVPB 的裂解活性为 64.8 U/mL,分子量约为 17 kDa。LysVPB 在 pH 值为 9.0 时具有更高的活性,而在 pH 值为 6.0-10.0 的宽泛范围内,其最大活性只有 60%。LysVPB 的催化效率在 30 °C 时达到峰值,但超过 50 °C 时则明显下降。Ba2+、Co2+ 和 Cu2+ 对 LysVPB 的活性有抑制作用,而 Ca2+ 则能将其活性提高到 126.8%。此外,LysVPB 对副溶血性弧菌菌株也表现出令人满意的功效。LysVPB 是一种创新的噬菌体溶菌酶,具有针对特定宿主的良好特性。LysVPB 的模块化特性允许与其他溶酶体进行有效的结构域交换,作为抗菌成分,并与抗菌肽融合。这就为在更广泛的目标宿主中设计具有高抗菌效力和生理条件下强活性的嵌合溶酶体提供了可能性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Protein expression and purification
Protein expression and purification 生物-生化研究方法
CiteScore
3.70
自引率
6.20%
发文量
120
审稿时长
32 days
期刊介绍: Protein Expression and Purification is an international journal providing a forum for the dissemination of new information on protein expression, extraction, purification, characterization, and/or applications using conventional biochemical and/or modern molecular biological approaches and methods, which are of broad interest to the field. The journal does not typically publish repetitive examples of protein expression and purification involving standard, well-established, methods. However, exceptions might include studies on important and/or difficult to express and/or purify proteins and/or studies that include extensive protein characterization, which provide new, previously unpublished information.
期刊最新文献
Expression and purification of the intact bacterial ergothioneine transporter EgtU. Editorial Board Recombinant human FOXJ1 protein binds DNA, forms higher-order oligomers, has gel-shifting domains and contains intrinsically disordered regions. Thermostable phenylacetic acid degradation protein TtPaaI from Thermus thermophilus as a scaffold for tetravalent display of proteins The heterogeneous expression, extraction, and purification of recombinant Caldanaerobacter subterraneus subsp. tengcongensis apurine/apyrimidine endonuclease in Escherichia coli
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1