Combining molecular transmission network analysis and spatial epidemiology to reveal HIV-1 transmission pattern among the older people in Nanjing, China

IF 4 3区 医学 Q2 VIROLOGY Virology Journal Pub Date : 2024-09-15 DOI:10.1186/s12985-024-02493-w
Yuanyuan Xu, Tingyi Jiang, Li Jiang, Hongjie Shi, Xin Li, Mengkai Qiao, Sushu Wu, Rong Wu, Xin Yuan, Jingwen Wang, Zhengping Zhu
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Abstract

In China, the problem of HIV infection among the older people has become increasingly prominent. This study aimed to analyze the pattern and influencing factors of HIV transmission based on a genomic and spatial epidemiological analysis among this population. A total of 432 older people who were aged ≥ 50 years, newly diagnosed with HIV-1 between January 2018 and December 2021 and without a history of ART were enrolled. HIV-1 pol gene sequence was obtained by viral RNA extraction and nested PCR. The molecular transmission network was constructed using HIV-TRACE and the spatial distribution analyses were performed in ArcGIS. The multivariate logistic regression analysis was performed to analyze the factors associated with clustering. A total of 382 sequences were successfully sequenced, of which CRF07_BC (52.3%), CRF01_AE (32.5%), and CRF08_BC (6.8%) were the main HIV-1 strains. A total of 176 sequences entered the molecular network, with a clustering rate of 46.1%. Impressively, the clustering rate among older people infected through commercial heterosexual contact was as high as 61.7% and three female sex workers (FSWs) were observed in the network. The individuals who were aged ≥ 60 years and transmitted the virus by commercial heterosexual contact had a higher clustering rate, while those who were retirees or engaged other occupations and with higher education degree were less likely to cluster. There was a positive spatial correlation of clustering rate (Global Moran I = 0.206, P < 0.001) at the town level and the highly aggregated regions were mainly distributed in rural area. We determined three large clusters which mainly spread in the intra-region of certain towns in rural areas. Notably, 54.5% of cases in large clusters were transmitted through commercial heterosexual contact. Our joint analysis of molecular and spatial epidemiology effectively revealed the spatial aggregation of HIV transmission and highlighted that towns of high aggregation were mainly located in rural area. Also, we found vital role of commercial heterosexual contact in HIV transmission among older people. Therefore, health resources should be directed towards highly aggregated rural areas and prevention strategy should take critical persons as entry points.
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结合分子传播网络分析和空间流行病学,揭示南京市老年人中的 HIV-1 传播模式
在中国,老年人感染艾滋病的问题日益突出。本研究旨在基于基因组学和空间流行病学分析,对该人群的艾滋病传播模式和影响因素进行分析。研究共纳入432名年龄≥50岁、2018年1月至2021年12月期间新确诊感染HIV-1且无抗逆转录病毒疗法史的老年人。通过病毒 RNA 提取和巢式 PCR 获得 HIV-1 pol 基因序列。使用 HIV-TRACE 构建分子传播网络,并在 ArcGIS 中进行空间分布分析。对聚类相关因素进行了多元逻辑回归分析。共成功测序了 382 个序列,其中 CRF07_BC(52.3%)、CRF01_AE(32.5%)和 CRF08_BC(6.8%)是主要的 HIV-1 株系。共有 176 个序列进入分子网络,聚类率为 46.1%。令人印象深刻的是,通过商业异性性接触感染的老年人的聚类率高达 61.7%,网络中还观察到 3 名女性性工作者(FSW)。年龄≥60 岁并通过商业异性性接触传播病毒的人的聚类率较高,而退休人员、从事其他职业和具有较高学历的人的聚类率较低。聚类率的空间相关性在镇一级呈正相关(Global Moran I = 0.206,P < 0.001),高度聚集区主要分布在农村地区。我们确定了三个大型聚类,主要分布在农村地区某些城镇的区域内。值得注意的是,大集群中 54.5% 的病例是通过商业性异性接触传播的。通过分子流行病学和空间流行病学的联合分析,我们有效地揭示了艾滋病传播的空间聚集性,并强调了高聚集性的城镇主要位于农村地区。此外,我们还发现商业性异性接触在老年人艾滋病传播中起着至关重要的作用。因此,应将卫生资源投向高度聚集的农村地区,预防策略应以关键人群为切入点。
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来源期刊
Virology Journal
Virology Journal 医学-病毒学
CiteScore
7.40
自引率
2.10%
发文量
186
审稿时长
1 months
期刊介绍: Virology Journal is an open access, peer reviewed journal that considers articles on all aspects of virology, including research on the viruses of animals, plants and microbes. The journal welcomes basic research as well as pre-clinical and clinical studies of novel diagnostic tools, vaccines and anti-viral therapies. The Editorial policy of Virology Journal is to publish all research which is assessed by peer reviewers to be a coherent and sound addition to the scientific literature, and puts less emphasis on interest levels or perceived impact.
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