Mycobacterial peptidyl prolyl isomerase A activates STING‐TBK1‐IRF3 signaling to promote IFNβ release in macrophages

Arun Kumar Sharma, Soumya Mal, Sanjaya Kumar Sahu, Shreya Bagchi, Debayan Majumder, Debangana Chakravorty, Sudipto Saha, Manikuntala Kundu, Joyoti Basu
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Abstract

Peptidyl prolyl isomerases (PPIases) are well‐conserved protein‐folding enzymes that moonlight as regulators of bacterial virulence. Peptidyl prolyl isomerase A, PPiA (Rv0009) is a secretory protein of Mycobacterium tuberculosis that possesses sequence and structural similarity to eukaryotic cyclophilins. In this study, we validated the interaction of PPiA with stimulator of interferon genes (STING) using both, Escherichia coli‐based and mammalian in vitro expression systems. In vitro pull‐down assays confirmed that the cytosolic domain of STING interacts with PPiA, and moreover, we found that PPiA could induce dimerization of STING in macrophages. In silico docking analyses suggested that the PXXP (PDP) motif of PPiA is crucial for interaction with STING, and concordantly, mutations in the PDP domain (PPiA MUT‐II) abrogated this interaction, as well as the ability of PPiA to facilitate STING dimerization. In agreement with these observations, fluorescence microscopy demonstrated that STING and wild‐type PPiA, but not PPiA MUT‐II, could colocalize when expressed in HEK293 cells. Highlighting the importance of the PDP domain further, PPiA, but not PPiA MUT‐II could activate Tank binding kinase 1 (TBK1)‐interferon regulatory factor 3 (IRF3) signaling to promote the release of interferon‐beta (IFNβ). PPiA, but not PPiA MUT‐II expressed in Mycobacterium smegmatis induced IFNβ release and facilitated bacterial survival in macrophages in a STING‐dependent manner. The PPiA‐induced release of IFNβ was c‐GAS independent. We conclude that PPiA is a previously undescribed mycobacterial regulator of STING‐dependent type I interferon production from macrophages.
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分枝杆菌肽基脯氨酰异构酶 A 激活 STING-TBK1-IRF3 信号,促进巨噬细胞释放 IFNβ
肽基脯氨酰异构酶(PPI酶)是一种保存完好的蛋白质折叠酶,也是细菌毒力的调控因子。肽基脯氨酰异构酶 A PPiA(Rv0009)是结核分枝杆菌的一种分泌蛋白,在序列和结构上与真核生物的环纤蛋白相似。在本研究中,我们利用大肠杆菌和哺乳动物体外表达系统验证了 PPiA 与干扰素基因刺激因子(STING)之间的相互作用。体外牵引试验证实 STING 的细胞膜结构域与 PPiA 相互作用,而且我们还发现 PPiA 能诱导巨噬细胞中的 STING 二聚化。默克对接分析表明,PPiA 的 PXXP(PDP)基序是与 STING 相互作用的关键,同时,PDP 结构域(PPiA MUT-II)的突变会削弱这种相互作用,并削弱 PPiA 促进 STING 二聚化的能力。荧光显微镜显示,STING 和野生型 PPiA 在 HEK293 细胞中表达时可以共聚焦,而 PPiA MUT-II 则不能。PPiA(而非 PPiA MUT-II)能激活 Tank 结合激酶 1(TBK1)-干扰素调节因子 3(IRF3)信号转导,促进干扰素-β(IFNβ)的释放,这进一步突出了 PDP 结构域的重要性。在分枝杆菌中表达的 PPiA(而非 PPiA MUT-II)以 STING 依赖性方式诱导 IFNβ 释放并促进巨噬细胞中细菌的存活。PPiA 诱导的 IFNβ 释放与 c-GAS 无关。我们的结论是,PPiA 是一种以前未曾描述过的巨噬细胞 STING 依赖性 I 型干扰素产生的分枝杆菌调节因子。
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