A Comprehensive Pan-Cancer Analysis Identified that TRIB3 was Associated with Immune Cell Infiltration and Poor Prognosis.

IF 2.2 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Current pharmaceutical biotechnology Pub Date : 2024-09-12 DOI:10.2174/0113892010308103240830063504
Ke Xun Yu, Wei Jie Yuan, Jing Li, Hui Zhen Wang, Yong Xiang Li
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Abstract

Background: Previous studies have demonstrated that TRIB3 plays a carcinogenic role in tumor progression. However, the exploration of TRIB3 at the pan-cancer level has not been reported.

Aims: This study aimed to conduct a comprehensive pan-cancer analysis of TRIB3.

Objective: We explored the expression pattern and functional mechanism of TRIB3 on the basis of multiple databases.

Method: We first explored the expression level of TRIB3 in the TCGA database. Then, the receiver operation characteristic curve (ROC), Kaplan-Meier plotter, and Cox regression were used to estimate the diagnostic and prognostic value of TRIB3, respectively. We also explored the relationship between TRIB3 and the infiltration of tumor immune cells, as well as the expression of immune checkpoint molecules. Gene enrichment and protein interaction network analysis were carried out to identify possible carcinogenic molecular mechanisms and functional pathways. Finally, we compared the non-promoter region methylation of TRIB3 in normal and tumor tissues and explored potential systems with unique functions in TRIB3-mediated tumorigenesis.

Result: The expression level of TRIB3 was elevated in multiple tumor types, and the high expression of TRIB3 was associated with poor prognosis. TRIB3 had a higher frequency of genetic changes in several tumors and showed varying trends in TRIB3 methylation levels. Additionally, high expression of TRIB3 was also associated with infiltration of cancer-related fibroblasts and different types of immune cells and was positively correlated with the expression of immune checkpoint molecules. Furthermore, gene enrichment analysis suggested that TRIB3 may play a role in the malignant progression of cancer by participating in protein post-translational modifications and activating transcription initiation factors.

Conclusion: Our pan-cancer analysis provided the potential carcinogenic role of TRIB3 in tumors and verified a promising target for clinical immune treatment.

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一项全面的泛癌症分析发现,TRIB3 与免疫细胞浸润和预后不良有关。
背景:先前的研究表明,TRIB3在肿瘤进展过程中起着致癌作用。目的:本研究旨在对 TRIB3 进行全面的泛癌症分析:目的:在多个数据库的基础上探讨 TRIB3 的表达模式和功能机制:方法:首先探讨TCGA数据库中TRIB3的表达水平。方法:我们首先探讨了TCGA数据库中TRIB3的表达水平,然后利用接收者操作特征曲线(ROC)、Kaplan-Meier绘图法和Cox回归法分别估算了TRIB3的诊断价值和预后价值。我们还探讨了TRIB3与肿瘤免疫细胞浸润以及免疫检查点分子表达之间的关系。我们还进行了基因富集和蛋白质相互作用网络分析,以确定可能的致癌分子机制和功能通路。最后,我们比较了TRIB3在正常组织和肿瘤组织中的非启动子区甲基化情况,并探索了在TRIB3介导的肿瘤发生过程中具有独特功能的潜在系统:结果:TRIB3在多种肿瘤类型中的表达水平均升高,TRIB3的高表达与预后不良相关。TRIB3在多种肿瘤中的遗传变异频率较高,且TRIB3甲基化水平呈不同趋势。此外,TRIB3的高表达还与癌症相关成纤维细胞和不同类型免疫细胞的浸润有关,并与免疫检查点分子的表达呈正相关。此外,基因富集分析表明,TRIB3可能通过参与蛋白质翻译后修饰和激活转录起始因子在癌症恶性进展中发挥作用:我们的泛癌分析提供了TRIB3在肿瘤中的潜在致癌作用,并验证了其是一个有希望的临床免疫治疗靶点。
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来源期刊
Current pharmaceutical biotechnology
Current pharmaceutical biotechnology 医学-生化与分子生物学
CiteScore
5.60
自引率
3.60%
发文量
203
审稿时长
6 months
期刊介绍: Current Pharmaceutical Biotechnology aims to cover all the latest and outstanding developments in Pharmaceutical Biotechnology. Each issue of the journal includes timely in-depth reviews, original research articles and letters written by leaders in the field, covering a range of current topics in scientific areas of Pharmaceutical Biotechnology. Invited and unsolicited review articles are welcome. The journal encourages contributions describing research at the interface of drug discovery and pharmacological applications, involving in vitro investigations and pre-clinical or clinical studies. Scientific areas within the scope of the journal include pharmaceutical chemistry, biochemistry and genetics, molecular and cellular biology, and polymer and materials sciences as they relate to pharmaceutical science and biotechnology. In addition, the journal also considers comprehensive studies and research advances pertaining food chemistry with pharmaceutical implication. Areas of interest include: DNA/protein engineering and processing Synthetic biotechnology Omics (genomics, proteomics, metabolomics and systems biology) Therapeutic biotechnology (gene therapy, peptide inhibitors, enzymes) Drug delivery and targeting Nanobiotechnology Molecular pharmaceutics and molecular pharmacology Analytical biotechnology (biosensing, advanced technology for detection of bioanalytes) Pharmacokinetics and pharmacodynamics Applied Microbiology Bioinformatics (computational biopharmaceutics and modeling) Environmental biotechnology Regenerative medicine (stem cells, tissue engineering and biomaterials) Translational immunology (cell therapies, antibody engineering, xenotransplantation) Industrial bioprocesses for drug production and development Biosafety Biotech ethics Special Issues devoted to crucial topics, providing the latest comprehensive information on cutting-edge areas of research and technological advances, are welcome. Current Pharmaceutical Biotechnology is an essential journal for academic, clinical, government and pharmaceutical scientists who wish to be kept informed and up-to-date with the latest and most important developments.
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