AIM/NBO Analysis of the Geminal Coupling Constants in the Stabilization of A-Type Dimeric Proanthocyanidin: Angular Dependence

IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Magnetic Resonance in Chemistry Pub Date : 2024-09-15 DOI:10.1002/mrc.5479
Rosana M. Lobayan, Patricio F. Provasi, Alicia B. Pomilio
{"title":"AIM/NBO Analysis of the Geminal Coupling Constants in the Stabilization of A-Type Dimeric Proanthocyanidin: Angular Dependence","authors":"Rosana M. Lobayan,&nbsp;Patricio F. Provasi,&nbsp;Alicia B. Pomilio","doi":"10.1002/mrc.5479","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>The angular dependence of the indirect short-range spin-spin coupling constants (SSCC), the geminal \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <mn>3</mn>\n </mrow>\n </msub>\n <mo>,</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left({C}_3,{C}_{1&amp;amp;#x0005E;{\\prime }}\\right) $$</annotation>\n </semantics></math>, \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <msub>\n <mrow>\n <mi>O</mi>\n </mrow>\n <mrow>\n <mn>1</mn>\n </mrow>\n </msub>\n <mo>,</mo>\n <mi>O</mi>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left({O}_1,O\\right) $$</annotation>\n </semantics></math>, and \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <mi>O</mi>\n <mo>,</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left(O,{C}_{1&amp;amp;#x0005E;{\\prime }}\\right) $$</annotation>\n </semantics></math> in A-type dimeric proanthocyanidin, was investigated using density functional theory. We studied the rotation of ring B around the \n<span></span><math>\n <semantics>\n <mrow>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <mn>2</mn>\n </mrow>\n </msub>\n <mtext>–</mtext>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n </mrow>\n <annotation>$$ {C}_2\\hbox{--} {C}_{1&amp;amp;#x0005E;{\\prime }} $$</annotation>\n </semantics></math> bond. Therefore, we calculated hyperconjugative charge transfers and bond polarizations within the natural bond orbital (NBO) approach, performing a topological study based on Bader's theory, AIM (atoms in molecules), and analyzing the angular dependence of AIM/NBO parameters. The results describe a relationship between the geminal coupling that changes with angular variation and NBO charge transfers to the bonds involved in the coupling pathways that can explain the behavior of the former property. Based on AIM/NBO data, inductive and mesomeric effects were described and quantified, showing a clear correlation with the stabilization of the structure, demonstrating a resonance-assisted inductive effect. We also set out strong hyperconjugative interactions (anomeric effect) involving nonbonding electron pairs of oxygen atoms. This analysis of coupling constants supports previous models by other authors and shows the application in this particular case. Moreover, the SSCCs studied herein are used for identifying stable structures and conformational search analysis of flavonoids. Finally, our results show the relationship between SSCCs and the structure stabilization and charge delocalization effects.</p>\n </div>","PeriodicalId":18142,"journal":{"name":"Magnetic Resonance in Chemistry","volume":"62 12","pages":"825-840"},"PeriodicalIF":1.9000,"publicationDate":"2024-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Magnetic Resonance in Chemistry","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/mrc.5479","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

Abstract

The angular dependence of the indirect short-range spin-spin coupling constants (SSCC), the geminal J ( C 3 , C 1 ) $$ J\left({C}_3,{C}_{1&amp;#x0005E;{\prime }}\right) $$ , J ( O 1 , O ) $$ J\left({O}_1,O\right) $$ , and J ( O , C 1 ) $$ J\left(O,{C}_{1&amp;#x0005E;{\prime }}\right) $$ in A-type dimeric proanthocyanidin, was investigated using density functional theory. We studied the rotation of ring B around the C 2 C 1 $$ {C}_2\hbox{--} {C}_{1&amp;#x0005E;{\prime }} $$ bond. Therefore, we calculated hyperconjugative charge transfers and bond polarizations within the natural bond orbital (NBO) approach, performing a topological study based on Bader's theory, AIM (atoms in molecules), and analyzing the angular dependence of AIM/NBO parameters. The results describe a relationship between the geminal coupling that changes with angular variation and NBO charge transfers to the bonds involved in the coupling pathways that can explain the behavior of the former property. Based on AIM/NBO data, inductive and mesomeric effects were described and quantified, showing a clear correlation with the stabilization of the structure, demonstrating a resonance-assisted inductive effect. We also set out strong hyperconjugative interactions (anomeric effect) involving nonbonding electron pairs of oxygen atoms. This analysis of coupling constants supports previous models by other authors and shows the application in this particular case. Moreover, the SSCCs studied herein are used for identifying stable structures and conformational search analysis of flavonoids. Finally, our results show the relationship between SSCCs and the structure stabilization and charge delocalization effects.

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
A 型二聚原花青素稳定过程中的宝石耦合常数的 AIM/NBO 分析:角度依赖性。
间接短程自旋-自旋耦合常数(SSCC)的角度依赖性,geminal J ( C 3 , C 1 ' ) $$ J\left({C}_3,{C}_{1^{\prime }}\right) $$ , J ( O 1 、O ) $$ J\left({O}_1,O\right) $$ , 和 J ( O , C 1 ' ) $$ J\left(O,{C}_{1^{\prime }}\right) $$ 在 A 型二聚原花青素中的作用。我们研究了环 B 围绕 C 2 - C 1 ' $$ {C}_2\hbox{--} 的旋转。{C}_{1^\{prime }}$$ 键的旋转。因此,我们在自然键轨道(NBO)方法中计算了超共轭电荷转移和键极化,根据贝德尔理论、AIM(分子中的原子)进行了拓扑研究,并分析了 AIM/NBO 参数的角度依赖性。研究结果描述了随角度变化而变化的宝石耦合与 NBO 电荷转移到耦合途径所涉及的键之间的关系,这种关系可以解释前一种性质的行为。根据 AIM/NBO 数据,我们描述并量化了感应效应和介观效应,结果显示它们与结构的稳定有明显的相关性,证明了共振辅助感应效应。我们还列出了涉及氧原子非键电子对的强超共轭相互作用(同分异构效应)。对耦合常数的分析支持了其他作者以前的模型,并显示了在这种特殊情况下的应用。此外,本文研究的 SSCC 可用于确定黄酮类化合物的稳定结构和构象搜索分析。最后,我们的研究结果表明了 SSCC 与结构稳定和电荷分散效应之间的关系。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
4.70
自引率
10.00%
发文量
99
审稿时长
1 months
期刊介绍: MRC is devoted to the rapid publication of papers which are concerned with the development of magnetic resonance techniques, or in which the application of such techniques plays a pivotal part. Contributions from scientists working in all areas of NMR, ESR and NQR are invited, and papers describing applications in all branches of chemistry, structural biology and materials chemistry are published. The journal is of particular interest not only to scientists working in academic research, but also those working in commercial organisations who need to keep up-to-date with the latest practical applications of magnetic resonance techniques.
期刊最新文献
Issue Information Enhancing Forensic Laboratories Through University Collaboration: Obtaining Conclusive Reports and Reference Materials via NMR. Structural Elucidation and NMR Spectral Assignments of New Diphenyl Ether Derivatives From Liuweizhiji Gegen-Sangshen Oral Liquid. Liquid-Phase NMR of Humic and Fulvic Acids. Two New Alkaloids of the Endophytic Fungus Rhizopus oryzae From Atractylodes macrocephala Koidz.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1