Engineering the mangrove soil microbiome for selection of polyethylene terephthalate-transforming bacterial consortia.

IF 14.3 1区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Trends in biotechnology Pub Date : 2024-09-20 DOI:10.1016/j.tibtech.2024.08.013
Diego Javier Jiménez, Dayanne Chaparro, Felipe Sierra, Gordon F Custer, Golo Feuerriegel, Maria Chuvochina, Laura Diaz-Garcia, Lucas William Mendes, Yina Paola Ortega Santiago, Carolina Rubiano-Labrador, Felipe Salcedo Galan, Wolfgang R Streit, Francisco Dini-Andreote, Alejandro Reyes, Alexandre Soares Rosado
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Abstract

Mangroves are impacted by multiple environmental stressors, including sea level rise, erosion, and plastic pollution. Thus, mangrove soil may be an excellent source of as yet unknown plastic-transforming microorganisms. Here, we assess the impact of polyethylene terephthalate (PET) particles and seawater intrusion on the mangrove soil microbiome and report an enrichment culture experiment to artificially select PET-transforming microbial consortia. The analysis of metagenome-assembled genomes of two bacterial consortia revealed that PET catabolism can be performed by multiple taxa, of which particular species harbored putative novel PET-active hydrolases. A key member of these consortia (Mangrovimarina plasticivorans gen. nov., sp. nov.) was found to contain two genes encoding monohydroxyethyl terephthalate hydrolases. This study provides insights into the development of strategies for harnessing soil microbiomes, thereby advancing our understanding of the ecology and enzymology involved in microbial-mediated PET transformations in marine-associated systems.

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利用红树林土壤微生物组来选择聚对苯二甲酸乙二醇酯转化细菌联合体。
红树林受到多种环境压力的影响,包括海平面上升、侵蚀和塑料污染。因此,红树林土壤可能是未知塑料转化微生物的极佳来源。在这里,我们评估了聚对苯二甲酸乙二醇酯(PET)颗粒和海水入侵对红树林土壤微生物组的影响,并报告了一项人工选择 PET 转化微生物联合体的富集培养实验。对两个细菌群的元基因组组装基因组的分析表明,PET分解代谢可由多个类群进行,其中特定物种含有假定的新型PET活性水解酶。发现这些菌群的一个关键成员(Mangrovimarina plasticivorans gen.nov.,sp.nov.)含有两个编码对苯二甲酸单羟乙基酯水解酶的基因。这项研究为制定利用土壤微生物群的战略提供了见解,从而促进了我们对海洋相关系统中微生物介导的 PET 转化所涉及的生态学和酶学的了解。
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来源期刊
Trends in biotechnology
Trends in biotechnology 工程技术-生物工程与应用微生物
CiteScore
28.60
自引率
1.20%
发文量
198
审稿时长
1 months
期刊介绍: Trends in Biotechnology publishes reviews and perspectives on the applied biological sciences, focusing on useful science applied to, derived from, or inspired by living systems. The major themes that TIBTECH is interested in include: Bioprocessing (biochemical engineering, applied enzymology, industrial biotechnology, biofuels, metabolic engineering) Omics (genome editing, single-cell technologies, bioinformatics, synthetic biology) Materials and devices (bionanotechnology, biomaterials, diagnostics/imaging/detection, soft robotics, biosensors/bioelectronics) Therapeutics (biofabrication, stem cells, tissue engineering and regenerative medicine, antibodies and other protein drugs, drug delivery) Agroenvironment (environmental engineering, bioremediation, genetically modified crops, sustainable development).
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