Advancing age grading techniques for Glossina morsitans morsitans, vectors of African trypanosomiasis, through mid-infrared spectroscopy and machine learning.

IF 2.5 Q3 BIOCHEMICAL RESEARCH METHODS Biology Methods and Protocols Pub Date : 2024-08-17 eCollection Date: 2024-01-01 DOI:10.1093/biomethods/bpae058
Mauro Pazmiño-Betancourth, Ivan Casas Gómez-Uribarri, Karina Mondragon-Shem, Simon A Babayan, Francesco Baldini, Lee Rafuse Haines
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Abstract

Tsetse are the insects responsible for transmitting African trypanosomes, which cause sleeping sickness in humans and animal trypanosomiasis in wildlife and livestock. Knowing the age of these flies is important when assessing the effectiveness of vector control programs and modelling disease risk. Current methods to assess fly age are, however, labour-intensive, slow, and often inaccurate as skilled personnel are in short supply. Mid-infrared spectroscopy (MIRS), a fast and cost-effective tool to accurately estimate several biological traits of insects, offers a promising alternative. This is achieved by characterising the biochemical composition of the insect cuticle using infrared light coupled with machine-learning (ML) algorithms to estimate the traits of interest. We tested the performance of MIRS in estimating tsetse sex and age for the first-time using spectra obtained from their cuticle. We used 541 insectary-reared Glossina m. morsitans of two different age groups for males (5 and 7 weeks) and three age groups for females (3 days, 5 weeks, and 7 weeks). Spectra were collected from the head, thorax, and abdomen of each sample. ML models differentiated between male and female flies with a 96% accuracy and predicted the age group with 94% and 87% accuracy for males and females, respectively. The key infrared regions important for discriminating sex and age classification were characteristic of lipid and protein content. Our results support the use of MIRS as a rapid and accurate way to identify tsetse sex and age with minimal pre-processing. Further validation using wild-caught tsetse could pave the way for this technique to be implemented as a routine surveillance tool in vector control programmes.

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通过中红外光谱仪和机器学习,推进非洲锥虫病传播媒介--莫西干蜱(Glossina morsitans morsitans)的年龄分级技术。
采采蝇是传播非洲锥虫的昆虫,非洲锥虫会导致人类昏睡病以及野生动物和牲畜的动物锥虫病。了解这些苍蝇的蝇龄对于评估病媒控制计划的有效性和模拟疾病风险非常重要。然而,目前评估苍蝇龄的方法需要大量人力,速度慢,而且由于技术人员短缺,往往不准确。中红外光谱仪(MIRS)是一种快速、经济有效的工具,可准确评估昆虫的多种生物特征,是一种很有前途的替代方法。其方法是利用红外光表征昆虫角质层的生化成分,并结合机器学习(ML)算法来估计相关性状。我们利用从采采蝇角质层获得的光谱首次测试了机器学习算法在估计采采蝇性别和年龄方面的性能。我们使用了 541 只昆虫饲养的雄性采采蝇(5 周和 7 周)和雌性采采蝇(3 天、5 周和 7 周)。从每个样本的头部、胸部和腹部采集光谱。ML 模型区分雄蝇和雌蝇的准确率为 96%,预测雄蝇和雌蝇年龄组的准确率分别为 94% 和 87%。区分性别和年龄的关键红外区域是脂质和蛋白质含量的特征。我们的研究结果支持使用红外红外光谱快速准确地识别采采蝇的性别和年龄,只需进行最少的预处理。利用野生捕获的采采蝇进行进一步验证,可为将该技术作为病媒控制计划中的常规监测工具铺平道路。
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来源期刊
Biology Methods and Protocols
Biology Methods and Protocols Agricultural and Biological Sciences-Agricultural and Biological Sciences (all)
CiteScore
3.80
自引率
2.80%
发文量
28
审稿时长
19 weeks
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