PhIP-Seq: methods, applications and challenges.

IF 2.8 Q2 MATHEMATICAL & COMPUTATIONAL BIOLOGY Frontiers in bioinformatics Pub Date : 2024-09-04 eCollection Date: 2024-01-01 DOI:10.3389/fbinf.2024.1424202
Ziru Huang, Samarappuli Mudiyanselage Savini Gunarathne, Wenwen Liu, Yuwei Zhou, Yuqing Jiang, Shiqi Li, Jian Huang
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Abstract

Phage-immunoprecipitation sequencing (PhIP-Seq) technology is an innovative, high-throughput antibody detection method. It enables comprehensive analysis of individual antibody profiles. This technology shows great potential, particularly in exploring disease mechanisms and immune responses. Currently, PhIP-Seq has been successfully applied in various fields, such as the exploration of biomarkers for autoimmune diseases, vaccine development, and allergen detection. A variety of bioinformatics tools have facilitated the development of this process. However, PhIP-Seq technology still faces many challenges and has room for improvement. Here, we review the methods, applications, and challenges of PhIP-Seq and discuss its future directions in immunological research and clinical applications. With continuous progress and optimization, PhIP-Seq is expected to play an even more important role in future biomedical research, providing new ideas and methods for disease prevention, diagnosis, and treatment.

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PhIP-Seq:方法、应用和挑战。
噬菌体免疫沉淀测序(PhIP-Seq)技术是一种创新的高通量抗体检测方法。它能对单个抗体概况进行全面分析。这项技术显示出巨大的潜力,尤其是在探索疾病机制和免疫反应方面。目前,PhIP-Seq 已成功应用于多个领域,如探索自身免疫性疾病的生物标志物、疫苗开发和过敏原检测。各种生物信息学工具促进了这一过程的发展。然而,PhIP-Seq 技术仍然面临着许多挑战和改进空间。在此,我们回顾了 PhIP-Seq 的方法、应用和挑战,并讨论了其在免疫学研究和临床应用中的未来发展方向。随着技术的不断进步和优化,PhIP-Seq有望在未来的生物医学研究中发挥更加重要的作用,为疾病的预防、诊断和治疗提供新的思路和方法。
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