Global and local feature extraction based on convolutional neural network residual learning for MR image denoising.

IF 3.3 3区 医学 Q2 ENGINEERING, BIOMEDICAL Physics in medicine and biology Pub Date : 2024-10-04 DOI:10.1088/1361-6560/ad7e78
Meng Li, Juntong Yun, Dingxi Liu, Daixiang Jiang, Hanlin Xiong, Du Jiang, Shunbo Hu, Rong Liu, Gongfa Li
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Abstract

Objective.Given the different noise distribution information of global and local magnetic resonance (MR) images, this study aims to extend the current work on convolutional neural networks that preserve global structure and local details in MR image denoising tasks.Approach.This study proposed a parallel and serial network for denoising 3D MR images, called 3D-PSNet. We use the residual depthwise separable convolution block to learn the local information of the feature map, reduce the network parameters, and thus improve the training speed and parameter efficiency. In addition, we consider the feature extraction of the global image and utilize residual dilated convolution to process the feature map to expand the receptive field of the network and avoid the loss of global information. Finally, we combine both of them to form a parallel network. What's more, we integrate reinforced residual convolution blocks with dense connections to form serial network branches, which can remove redundant information and refine features to further obtain accurate noise information.Main results.The peak signal-to-noise ratio, structural similarity index measure, and root mean square error metrics of 3D-PSNet are as high as 47.79%, 99.81%, and 0.40%, respectively, achieving competitive denoising effect on three public datasets. The ablation experiments demonstrated the effectiveness of all the designed modules regarding all the evaluated metrics in both datasets.Significance.The proposed 3D-PSNet takes advantage of multi-scale receptive fields, local feature extraction and residual dense connections to more effectively restore the global structure and local fine features in MR images, and is expected to help doctors quickly and accurately diagnose patients' conditions.

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基于卷积神经网络残差学习的全局和局部特征提取,用于磁共振图像去噪。
目的:鉴于全局和局部磁共振(MR)图像的噪声分布信息不同,本研究旨在扩展卷积神经网络的现有工作,在磁共振图像去噪任务中保留全局结构和局部细节:本研究提出了一种用于三维磁共振图像去噪的并行和串行网络,称为 3D-PSNet 。我们利用残差深度可分离卷积块来学习特征图的局部信息,减少网络参数,从而提高训练速度和参数效率。此外,我们还考虑了全局图像的特征提取,并利用残差扩张卷积来处理特征图,以扩大网络的感受野,避免全局信息的丢失。最后,我们将两者结合起来,形成一个并行网络。此外,我们还整合了具有密集连接的强化残差卷积块,形成串行网络分支,从而去除冗余信息,细化特征,进一步获取准确的噪声信息。3D-PSNet的峰值信噪比、结构相似度指标和均方根误差指标分别高达47.79%、99.81%和0.40%,在三个公开数据集上取得了具有竞争力的去噪效果。消融实验表明,在两个数据集的所有评估指标上,所有设计的模块都是有效的:所提出的 3D-PSNet 利用多尺度感受野、局部特征提取和残余密集连接的优势,更有效地还原了磁共振图像的全局结构和局部精细特征,有望帮助医生快速准确地诊断患者病情。
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来源期刊
Physics in medicine and biology
Physics in medicine and biology 医学-工程:生物医学
CiteScore
6.50
自引率
14.30%
发文量
409
审稿时长
2 months
期刊介绍: The development and application of theoretical, computational and experimental physics to medicine, physiology and biology. Topics covered are: therapy physics (including ionizing and non-ionizing radiation); biomedical imaging (e.g. x-ray, magnetic resonance, ultrasound, optical and nuclear imaging); image-guided interventions; image reconstruction and analysis (including kinetic modelling); artificial intelligence in biomedical physics and analysis; nanoparticles in imaging and therapy; radiobiology; radiation protection and patient dose monitoring; radiation dosimetry
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