Deep evidential learning for radiotherapy dose prediction

IF 7 2区 医学 Q1 BIOLOGY Computers in biology and medicine Pub Date : 2024-09-23 DOI:10.1016/j.compbiomed.2024.109172
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Abstract

Background:

As we navigate towards integrating deep learning methods in the real clinic, a safety concern lies in whether and how the model can express its own uncertainty when making predictions. In this work, we present a novel application of an uncertainty-quantification framework called Deep Evidential Learning in the domain of radiotherapy dose prediction.

Method:

Using medical images of the Open Knowledge-Based Planning Challenge dataset, we found that this model can be effectively harnessed to yield uncertainty estimates that inherited correlations with prediction errors upon completion of network training. This was achieved only after reformulating the original loss function for a stable implementation.

Results:

We found that (i) epistemic uncertainty was highly correlated with prediction errors, with various association indices comparable or stronger than those for Monte-Carlo Dropout and Deep Ensemble methods, (ii) the median error varied with uncertainty threshold much more linearly for epistemic uncertainty in Deep Evidential Learning relative to these other two conventional frameworks, indicative of a more uniformly calibrated sensitivity to model errors, (iii) relative to epistemic uncertainty, aleatoric uncertainty demonstrated a more significant shift in its distribution in response to Gaussian noise added to CT intensity, compatible with its interpretation as reflecting data noise.

Conclusion:

Collectively, our results suggest that Deep Evidential Learning is a promising approach that can endow deep-learning models in radiotherapy dose prediction with statistical robustness. We have also demonstrated how this framework leads to uncertainty heatmaps that correlate strongly with model errors, and how it can be used to equip the predicted Dose-Volume-Histograms with confidence intervals.

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用于放疗剂量预测的深度证据学习
背景:在我们将深度学习方法应用于实际临床的过程中,一个安全问题是模型在进行预测时能否以及如何表达自身的不确定性。在这项工作中,我们介绍了一种不确定性量化框架--"深度证据学习"(Deep Evidential Learning)--在放疗剂量预测领域的新应用。方法:通过使用 "开放知识规划挑战赛 "数据集的医学影像,我们发现可以有效利用该模型,在完成网络训练后,产生与预测误差继承相关的不确定性估计。只有在重新制定原始损失函数以稳定实现后,才能达到这一目的。结果我们发现:(i) 认识不确定性与预测误差高度相关,各种关联指数与 Monte-Carlo Dropout 和 Deep Ensemble 方法的关联指数相当或更强;(ii) 相对于其他两种传统框架,Deep Evidential Learning 中认识不确定性的中位误差随不确定性阈值的线性变化更大、(iii)相对于认识不确定性,高斯不确定性在 CT 强度中加入高斯噪声后,其分布发生了更显著的变化,这与将其解释为反映数据噪声是一致的。结论:总之,我们的研究结果表明,深度证据学习是一种很有前途的方法,它能赋予深度学习模型在放射治疗剂量预测中的统计稳健性。我们还展示了这一框架如何产生与模型误差密切相关的不确定性热图,以及如何利用它为预测的剂量-容积-组方图配备置信区间。
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来源期刊
Computers in biology and medicine
Computers in biology and medicine 工程技术-工程:生物医学
CiteScore
11.70
自引率
10.40%
发文量
1086
审稿时长
74 days
期刊介绍: Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.
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