22. Advancing personalized prostate cancer care: Utilizing miRNA profiling and machine learning for metastasis prediction

IF 1.4 4区 医学 Q4 GENETICS & HEREDITY Cancer Genetics Pub Date : 2024-08-01 DOI:10.1016/j.cancergen.2024.08.024
Arun Seth , Gobi Thillainadesan , Yutaka Amemiya , Robert Nam
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Abstract

In the pursuit of advancing personalized medicine for prostate cancer treatment, the identification of critical biomarkers is crucial for tailoring therapies and improving patient outcomes. Building upon our prior research, where we conducted high-throughput small RNA sequencing on 38 post-operative prostate cancer patients matched by Gleason scores, this study aims to refine our understanding and enhance the accuracy of microRNA-based predictions through sophisticated computational biology techniques.
Through meticulous computational approaches and rigorous statistical analysis, we have identified microRNAs exhibiting significant expression differences between metastatic and non-metastatic cases post-surgery. This has led to the identification of six high-confidence microRNAs: miR-6761, miR-93-5p, miR-92a-3p, miR-149-5p, miR-429, and miR-671-5p, marking a significant advancement in post-operative care.
Expanding our dataset with an additional 100 supporting microRNAs, we are pioneering the training of a neural network machine learning algorithm. This innovative approach aims to accurately predict the risk of metastasis after surgery, providing a ground-breaking tool for personalized patient monitoring and treatment decision-making.
By integrating these biomarkers into a neural network model, we anticipate establishing a new standard in post-operative care for prostate cancer patients, ultimately guiding more effective monitoring strategies and improving quality of life. This study not only emphasizes the importance of microRNA profiling in prostate cancer prognosis clinical scenario but also showcases the potential of machine learning in revolutionizing cancer care.
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22.推进个性化前列腺癌治疗:利用 miRNA 图谱和机器学习预测转移
在推进前列腺癌个性化治疗的过程中,关键生物标志物的鉴定对于调整疗法和改善患者预后至关重要。在我们之前的研究基础上,我们对 38 名术后前列腺癌患者进行了高通量小 RNA 测序,并根据格里森评分进行了配对。通过细致的计算方法和严格的统计分析,我们确定了在术后转移性和非转移性病例中表现出显著表达差异的 microRNA。我们通过细致的计算方法和严谨的统计分析,确定了在术后转移和非转移病例中表现出明显表达差异的 microRNA,这标志着我们在术后护理方面取得了重大进展。我们正在扩大数据集,增加 100 个支持性 microRNA,并率先训练神经网络机器学习算法。通过将这些生物标志物整合到神经网络模型中,我们预计将建立前列腺癌患者术后护理的新标准,最终指导更有效的监测策略并提高生活质量。这项研究不仅强调了 microRNA 图谱分析在前列腺癌预后临床方案中的重要性,还展示了机器学习在彻底改变癌症护理方面的潜力。
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来源期刊
Cancer Genetics
Cancer Genetics ONCOLOGY-GENETICS & HEREDITY
CiteScore
3.20
自引率
5.30%
发文量
167
审稿时长
27 days
期刊介绍: The aim of Cancer Genetics is to publish high quality scientific papers on the cellular, genetic and molecular aspects of cancer, including cancer predisposition and clinical diagnostic applications. Specific areas of interest include descriptions of new chromosomal, molecular or epigenetic alterations in benign and malignant diseases; novel laboratory approaches for identification and characterization of chromosomal rearrangements or genomic alterations in cancer cells; correlation of genetic changes with pathology and clinical presentation; and the molecular genetics of cancer predisposition. To reach a basic science and clinical multidisciplinary audience, we welcome original full-length articles, reviews, meeting summaries, brief reports, and letters to the editor.
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