Homonuclear Super-Resolution NMR Spectroscopy

IF 19.3 1区 材料科学 Q1 CHEMISTRY, PHYSICAL ACS Energy Letters Pub Date : 2024-09-30 DOI:10.1002/anie.202414324
Olivia Gampp, Luca Wenchel, Peter Güntert, Roland Riek
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Abstract

Homonuclear 1H NMR (nuclear magnetic resonance) spectra such as the [1H,1H]-NOESY (Nuclear Overhauser Enhancement spectroscopy) are essential for biomolecular structural biology. However, the spectrum contains hundreds to thousands of cross peaks meaning that within approximately 100 ppm2 there is significant signal overlap. Spectral resolution is thus a limiting factor for data interpretation for dynamics and structure elucidation. Acquiring the spectra at higher magnetic fields such as at a 1.2 GHz 1H frequency helps to reduce spectral crowding, since resolution scales proportionally to the magnetic field strength. Here, we show that the linewidths' of cross peaks in [1H,1H]-NOESY and [1H,1H]-TOCSY spectra can be further reduced by a factor of 2–3 in each dimension by super-resolution spectroscopy. In the indirect dimension a composite exponential-cosine weighted number of scans along the time increments are recorded and digitally smoothened by a window function. Furthermore, measurement time saving by reduced-acquisition super-resolution (RASR) is introduced. Application to the 20 kDa protein KRAS shows that highly resolved NMR spectra suitable for automated analysis can be acquired within less than 3 hours. The method opens an avenue towards automated chemical shift assignment, dynamics and structure determination of unlabeled small and medium size proteins within 24 hours.
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同核超分辨率核磁共振波谱学
同核 1H NMR(核磁共振)光谱,如[1H,1H]-NOESY(核超豪瑟增强光谱),对于生物分子结构生物学至关重要。然而,该光谱包含数百至数千个交叉峰,这意味着在大约 100 ppm2 的范围内存在大量信号重叠。因此,光谱分辨率是动态和结构阐释数据解读的限制因素。在较高磁场(如 1.2 GHz 1H 频率)下获取光谱有助于减少光谱拥挤,因为分辨率与磁场强度成比例。在这里,我们展示了通过超分辨率光谱法,[1H,1H]-NOESY 和 [1H,1H]-TOCSY 光谱中交叉峰的线宽可以在每个维度上进一步缩小 2-3 倍。在间接维度上,沿时间增量记录指数余弦加权的复合扫描次数,并通过窗口函数进行数字平滑处理。此外,还引入了减少获取超分辨率(RASR)来节省测量时间。对 20 kDa 蛋白质 KRAS 的应用表明,适合自动分析的高分辨率 NMR 图谱可在 3 小时内获得。该方法为在 24 小时内对未标记的中小型蛋白质进行自动化学位移分配、动力学和结构测定开辟了一条途径。
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来源期刊
ACS Energy Letters
ACS Energy Letters Energy-Renewable Energy, Sustainability and the Environment
CiteScore
31.20
自引率
5.00%
发文量
469
审稿时长
1 months
期刊介绍: ACS Energy Letters is a monthly journal that publishes papers reporting new scientific advances in energy research. The journal focuses on topics that are of interest to scientists working in the fundamental and applied sciences. Rapid publication is a central criterion for acceptance, and the journal is known for its quick publication times, with an average of 4-6 weeks from submission to web publication in As Soon As Publishable format. ACS Energy Letters is ranked as the number one journal in the Web of Science Electrochemistry category. It also ranks within the top 10 journals for Physical Chemistry, Energy & Fuels, and Nanoscience & Nanotechnology. The journal offers several types of articles, including Letters, Energy Express, Perspectives, Reviews, Editorials, Viewpoints and Energy Focus. Additionally, authors have the option to submit videos that summarize or support the information presented in a Perspective or Review article, which can be highlighted on the journal's website. ACS Energy Letters is abstracted and indexed in Chemical Abstracts Service/SciFinder, EBSCO-summon, PubMed, Web of Science, Scopus and Portico.
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