Unveiling Functional Biomarkers in Schizophrenia: Insights from Region of Interest Analysis Using Machine Learning.

IF 2.5 4区 医学 Q3 NEUROSCIENCES Journal of integrative neuroscience Pub Date : 2024-09-24 DOI:10.31083/j.jin2309179
Indranath Chatterjee, Lea Baumgärtner
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Abstract

Background: Schizophrenia is a complex and disabling mental disorder that represents one of the most important challenges for neuroimaging research. There were many attempts to understand these basic mechanisms behind the disorder, yet we know very little. By employing machine learning techniques with age-matched samples from the auditory oddball task using multi-site functional magnetic resonance imaging (fMRI) data, this study aims to address these challenges.

Methods: The study employed a three-stage model to gain a better understanding of the neurobiology underlying schizophrenia and techniques that could be applied for diagnosis. At first, we constructed four-level hierarchical sets from each fMRI volume of 34 schizophrenia patients (SZ) and healthy controls (HC) individually in terms of hemisphere, gyrus, lobes, and Brodmann areas. Second, we employed statistical methods, namely, t-tests and Pearson's correlation, to assess the group differences in cortical activation. Finally, we assessed the predictive power of the brain regions for machine learning algorithms using K-nearest Neighbor (KNN), Naive Bayes, Decision Tree (DT), Random Forest (RF), Support Vector Machines (SVMs), and Extreme Learning Machine (ELM).

Results: Our investigation depicts promising results, obtaining an accuracy of up to 84% when applying Pearson's correlation-selected features at lobes and Brodmann region level (81% for Gyrus), as well as Hemispheres involving different stages. Thus, the results of our study were consistent with previous studies that have revealed some functional abnormalities in several brain regions. We also discovered the involvement of other brain regions which were never sufficiently studied in previous literature, such as the posterior lobe (posterior cerebellum), Pyramis, and Brodmann Area 34.

Conclusions: We present a unique and comprehensive approach to investigating the neurological basis of schizophrenia in this study. By bridging the gap between neuroimaging and computable analysis, we aim to improve diagnostic accuracy in patients with schizophrenia and identify potential prognostic markers for disease progression.

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揭示精神分裂症的功能性生物标记物:利用机器学习从感兴趣区分析中获得的启示。
背景:精神分裂症是一种复杂的致残性精神障碍,是神经影像学研究面临的最重要挑战之一。我们曾多次尝试了解这种疾病背后的基本机制,但所知甚少。本研究采用机器学习技术,利用多部位功能磁共振成像(fMRI)数据对年龄匹配的听觉怪球任务样本进行分析,旨在解决这些难题:本研究采用了一个三阶段模型,以更好地了解精神分裂症的神经生物学基础以及可用于诊断的技术。首先,我们从 34 名精神分裂症患者(SZ)和健康对照组(HC)的每个 fMRI 容积出发,分别从半球、回、脑叶和 Brodmann 区域构建了四级分层集。其次,我们采用统计学方法,即 t 检验和皮尔逊相关性,来评估皮质激活的群体差异。最后,我们使用 K-nearest Neighbor (KNN)、Naive Bayes、决策树 (DT)、随机森林 (RF)、支持向量机 (SVM) 和极限学习机 (ELM) 等机器学习算法评估了大脑区域的预测能力:我们的研究取得了可喜的成果,在脑叶和布罗德曼区域级别(脑回为 81%)以及涉及不同阶段的半球应用皮尔逊相关性选择特征时,准确率高达 84%。因此,我们的研究结果与之前发现多个脑区存在功能异常的研究结果一致。我们还发现了以往文献从未充分研究过的其他脑区,如后叶(小脑后叶)、Pyramis 和 Brodmann 第 34 区:在这项研究中,我们提出了一种独特而全面的方法来研究精神分裂症的神经学基础。通过弥合神经影像学与可计算分析之间的差距,我们旨在提高精神分裂症患者的诊断准确性,并确定疾病进展的潜在预后标志物。
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来源期刊
CiteScore
2.80
自引率
5.60%
发文量
173
审稿时长
2 months
期刊介绍: JIN is an international peer-reviewed, open access journal. JIN publishes leading-edge research at the interface of theoretical and experimental neuroscience, focusing across hierarchical levels of brain organization to better understand how diverse functions are integrated. We encourage submissions from scientists of all specialties that relate to brain functioning.
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