Elucidating Thermothielavioides terrestris secretome changes for improved saccharification of mild steam-pretreated spruce

IF 6.1 1区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Biotechnology for Biofuels Pub Date : 2024-10-05 DOI:10.1186/s13068-024-02569-3
Fabio Caputo, Romanos Siaperas, Camila Dias, Efstratios Nikolaivits, Lisbeth Olsson
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Abstract

Background

The efficient use of softwood in biorefineries is hampered by its recalcitrance to enzymatic saccharification. In the present study, the fungus Thermothielavioides terrestris LPH172 was cultivated on three steam-pretreated spruce materials (STEX180°C/auto, STEX210°C/auto, and STEX210°C/H2SO4), characterized by different hemicellulose content and structure, as well as on untreated biomass. The aim of the study was to map substrate-induced changes in the secretome of T. terrestris grown on differently treated spruce materials and to evaluate the hydrolytic efficiency of the secretome as supplement for a commercial enzyme mixture.

Results

The cultivation of T. terrestris was monitored by endo-cellulase, endo-xylanase, endo-mannanase, laccase, and peroxidase activity measurements. Proteomic analysis was performed on the secretomes induced by the spruce materials to map the differences in enzyme production. Growth of T. terrestris on STEX180°C/auto and STEX210°C/auto induced higher expression level of mannanases and mannosidases of the GH5_7 CAZy family compared to cultivation on the other materials. Cultivation on untreated biomass led to overexpression of GH47, GH76, and several hemicellulose debranching enzymes compared to the cultivation on the pretreated materials. T. terrestris grown on untreated, STEX180°C/auto and STEX210°C/auto induced three arabinofuranosidases of the GH43 and GH62 families; while growth on STEX210°C/H2SO4 induced a GH51 arabinofuranosidase and a GH115 glucuronidase. All secretomes contained five lytic polysaccharide monooxygenases of the AA9 family. Supplementation of Celluclast® + Novozym188 with the secretome obtained by growing the fungus grown on STEX180°C/auto achieved a twofold higher release of mannose from spruce steam-pretreated with acetic acid as catalyst, compared to the commercial enzyme cocktail alone.

Conclusions

Minor changes in the structure and composition of spruce affect the composition of fungal secretomes, with differences in some classes explaining an increased hydrolytic efficiency. As demonstrated here, saccharification of spruce biomass with commercial enzyme cocktails can be further enhanced by supplementation with tailor-made secretomes.

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阐明 Thermothielavioides terrestris 分泌组的变化,以改进温和蒸汽预处理云杉的糖化。
背景:软木对酶糖化的不适应性阻碍了生物炼油厂对其的有效利用。本研究在三种蒸汽预处理云杉材料(STEX180°C/auto、STEX210°C/auto 和 STEX210°C/H2SO4)(其半纤维素含量和结构各不相同)以及未经处理的生物质上培养了 Thermothielavioides terrestris LPH172 真菌。研究的目的是绘制在不同处理云杉材料上生长的赤霉菌分泌物组的基质诱导变化图,并评估分泌物组作为商用酶混合物补充的水解效率:结果:通过测量内切纤维素酶、内切木聚糖酶、内切甘露聚糖酶、漆酶和过氧化物酶的活性来监测赤霉菌的培养过程。对云杉材料诱导的分泌物组进行了蛋白质组分析,以绘制酶生产的差异图。与其他材料相比,在 STEX180°C/auto 和 STEX210°C/auto 上生长的 T. terrestris 能诱导更高水平的甘露聚糖酶和 GH5_7 CAZy 家族甘露糖苷酶的表达。与在预处理过的材料上培养相比,在未经处理的生物质上培养会导致 GH47、GH76 和几种半纤维素去支链酶的过度表达。在未经处理、STEX180°C/自动和STEX210°C/自动条件下生长的赤霉菌诱导了三种阿拉伯呋喃糖苷酶(GH43和GH62家族);而在STEX210°C/H2SO4条件下生长的赤霉菌诱导了一种GH51阿拉伯呋喃糖苷酶和一种GH115葡糖醛酸酶。所有分泌物组都含有 AA9 家族的五种裂解多糖单氧化酶。与单独使用商业鸡尾酒酶相比,使用 Celluclast® + Novozym188 补充在 STEX180°C/auto 上培养真菌获得的分泌物组,可使以乙酸为催化剂蒸汽预处理的云杉中甘露糖的释放量提高两倍:结论:云杉结构和组成的细微变化会影响真菌分泌物的组成,某些类别的差异可解释水解效率提高的原因。正如本文所展示的,使用商业鸡尾酒酶对云杉生物质进行糖化,可以通过补充定制的分泌物得到进一步提高。
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来源期刊
Biotechnology for Biofuels
Biotechnology for Biofuels 工程技术-生物工程与应用微生物
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审稿时长
2.7 months
期刊介绍: Biotechnology for Biofuels is an open access peer-reviewed journal featuring high-quality studies describing technological and operational advances in the production of biofuels, chemicals and other bioproducts. The journal emphasizes understanding and advancing the application of biotechnology and synergistic operations to improve plants and biological conversion systems for the biological production of these products from biomass, intermediates derived from biomass, or CO2, as well as upstream or downstream operations that are integral to biological conversion of biomass. Biotechnology for Biofuels focuses on the following areas: • Development of terrestrial plant feedstocks • Development of algal feedstocks • Biomass pretreatment, fractionation and extraction for biological conversion • Enzyme engineering, production and analysis • Bacterial genetics, physiology and metabolic engineering • Fungal/yeast genetics, physiology and metabolic engineering • Fermentation, biocatalytic conversion and reaction dynamics • Biological production of chemicals and bioproducts from biomass • Anaerobic digestion, biohydrogen and bioelectricity • Bioprocess integration, techno-economic analysis, modelling and policy • Life cycle assessment and environmental impact analysis
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