Genomic analysis and mechanisms exploration of a stress tolerance and high-yield pullulan producing strain.

IF 2.8 3区 生物学 Q2 GENETICS & HEREDITY Frontiers in Genetics Pub Date : 2024-09-20 eCollection Date: 2024-01-01 DOI:10.3389/fgene.2024.1469600
Jing Yang, Ning Sun, Wenru Wang, Ruihua Zhang, Siqi Sun, Biqi Li, Yue Shi, Junfeng Zeng, Shulei Jia
{"title":"Genomic analysis and mechanisms exploration of a stress tolerance and high-yield pullulan producing strain.","authors":"Jing Yang, Ning Sun, Wenru Wang, Ruihua Zhang, Siqi Sun, Biqi Li, Yue Shi, Junfeng Zeng, Shulei Jia","doi":"10.3389/fgene.2024.1469600","DOIUrl":null,"url":null,"abstract":"<p><p>Pullulan is a kind of natural polymer, which is widely used in medicine and food because of its solubility, plasticity, edible, non-toxicity and good biocompatibility. It is of great significance to improve the yield of pullulan by genetic modification of microorganisms. It was previously reported that <i>Aureobasidium melanogenum</i> TN3-1 isolated from honey-comb could produce high-yield of pullulan, but the molecular mechanisms of its production of pullulan had not been completely solved. In this study, the reported strains of <i>Aureobasidium</i> spp. were further compared and analyzed at genome level. It was found that genome duplication and genome genetic variations might be the crucial factors for the high yield of pullulan and stress resistance. This particular phenotype may be the result of adaptive evolution, which can adapt to its environment through genetic variation and adaptive selection. In addition, the TN3-1 strain has a large genome, and the special regulatory sequences of its specific genes and promoters may ensure a unique characteristics. This study is a supplement of the previous studies, and provides basic data for the research of microbial genome modification in food and healthcare applications.</p>","PeriodicalId":12750,"journal":{"name":"Frontiers in Genetics","volume":null,"pages":null},"PeriodicalIF":2.8000,"publicationDate":"2024-09-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11449735/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Genetics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3389/fgene.2024.1469600","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Pullulan is a kind of natural polymer, which is widely used in medicine and food because of its solubility, plasticity, edible, non-toxicity and good biocompatibility. It is of great significance to improve the yield of pullulan by genetic modification of microorganisms. It was previously reported that Aureobasidium melanogenum TN3-1 isolated from honey-comb could produce high-yield of pullulan, but the molecular mechanisms of its production of pullulan had not been completely solved. In this study, the reported strains of Aureobasidium spp. were further compared and analyzed at genome level. It was found that genome duplication and genome genetic variations might be the crucial factors for the high yield of pullulan and stress resistance. This particular phenotype may be the result of adaptive evolution, which can adapt to its environment through genetic variation and adaptive selection. In addition, the TN3-1 strain has a large genome, and the special regulatory sequences of its specific genes and promoters may ensure a unique characteristics. This study is a supplement of the previous studies, and provides basic data for the research of microbial genome modification in food and healthcare applications.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
耐逆性和高产乌拉坦生产菌株的基因组分析和机制探索。
普鲁兰是一种天然聚合物,因其溶解性、可塑性、可食性、无毒性和良好的生物相容性而被广泛应用于医药和食品领域。通过对微生物进行基因改造来提高乌拉坦的产量具有重要意义。此前有报道称,从蜂蜜梳子中分离出的 Aureobasidium melanogenum TN3-1 可高产生产拉毛素,但其生产拉毛素的分子机制尚未完全解开。本研究从基因组水平对已报道的 Aureobasidium 菌株进行了进一步比较和分析。结果发现,基因组复制和基因组遗传变异可能是产生高产拉毛藻胶和抗逆性的关键因素。这种特殊的表型可能是适应性进化的结果,它能通过基因变异和适应性选择来适应环境。此外,TN3-1 菌株的基因组较大,其特定基因和启动子的特殊调控序列可能会确保其具有独特的特征。本研究是对以往研究的补充,为微生物基因组改造在食品和医疗保健领域的应用研究提供了基础数据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Frontiers in Genetics
Frontiers in Genetics Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
5.50
自引率
8.10%
发文量
3491
审稿时长
14 weeks
期刊介绍: Frontiers in Genetics publishes rigorously peer-reviewed research on genes and genomes relating to all the domains of life, from humans to plants to livestock and other model organisms. Led by an outstanding Editorial Board of the world’s leading experts, this multidisciplinary, open-access journal is at the forefront of communicating cutting-edge research to researchers, academics, clinicians, policy makers and the public. The study of inheritance and the impact of the genome on various biological processes is well documented. However, the majority of discoveries are still to come. A new era is seeing major developments in the function and variability of the genome, the use of genetic and genomic tools and the analysis of the genetic basis of various biological phenomena.
期刊最新文献
Identification of m5C-Related gene diagnostic biomarkers for sepsis: a machine learning study. Number of human protein interactions correlates with structural, but not regulatory conservation of the respective genes. Comparison of blood parameters in two genetically different groups of horses for functional longevity in show jumping. Editorial: Non-coding RNAs and human diseases volume 2 -long non-coding RNAs and pathogenesis of human disease. Editorial: Epigenetic modification in neurological diseases.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1