Eicosanoid biosynthesizing enzymes in Prototheria

IF 3.9 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochimica et biophysica acta. Molecular and cell biology of lipids Pub Date : 2024-10-09 DOI:10.1016/j.bbalip.2024.159569
Kumar R. Kakularam , Eda Gündem , Sabine Stehling , Michael Rothe , Dagmar Heydeck , Hartmut Kuhn
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Abstract

Eicosanoids and related compounds are pleiotropic lipid mediators, which play a role in cell differentiation and in the pathogenesis of various diseases. The biosynthesis of these lipids has extensively been studied in highly developed mammals including humans but little is known about the formation of these mediators in more ancient Prototheria.
We searched the genomes of two extant prototherian species (platypus, short-beaked echidna) for genes encoding for lipoxygenase- (ALOX) and prostaglandin synthase-isoforms (PTGS) and detected intact single copy genes for ALOX5, ALOX12, ALOX12B, ALOXE3, PTGS1 and PTGS2. Moreover, we identified two copies of ALOX15B genes (ALOX15B-1 and ALOX15B-2) but in echidna the ALOX15B-2 gene was structurally corrupted. Interestingly, in the two genomes ALOX15 genes were lacking. For functional characterization we expressed the prototherian ALOX15B isoforms and compared important enzyme characteristics of the wildtype proteins and of relevant enzyme mutants with those of human and mouse ALOX15B. Here we observed that the prototherian ALOX15B isoforms exhibit the same reaction specificity as their human ortholog. Mutagenesis of the Triad determinants did not alter the reaction specificity of the prototherian enzymes but modification of the Jisaka determinants murinized the catalytic properties.
These data indicate that Prototheria exhibit an active eicosanoid metabolism. They express functional ALOX15B orthologs but lack ALOX15 genes. These observations and the previous findings that ALOX15 orthologs rarely occur in non-mammalian vertebrates such as fish and birds suggest that ALOX15 orthologs were introduced during PrototheriaMetatheria transition via an ALOX15B gene duplication and subsequent divergent enzyme evolution.
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原肠动物中的二十烷生物合成酶。
二十烷类脂和相关化合物是多种脂质介质,在细胞分化和各种疾病的发病机制中发挥作用。这些脂质的生物合成在包括人类在内的高度发达的哺乳动物中得到了广泛的研究,但对这些介质在更古老的原热动物中的形成却知之甚少。我们在两个现生原生动物(鸭嘴兽和短喙针鼹)的基因组中搜索了编码脂氧合酶和前列腺素合成酶同工酶的基因,发现了完整的单拷贝 ALOX5、ALOX12、ALOX12B、ALOXE3、PTGS1 和 PTGS2 基因。此外,我们还发现了两个 ALOX15B 基因拷贝(ALOX15B-1 和 ALOX15B-2),但在针鼹鼠中,ALOX15B-2 基因的结构已被破坏。有趣的是,这两个基因组中都缺少 ALOX15 基因。为了确定功能特征,我们表达了原热虫的 ALOX15B 异构体,并将野生型蛋白和相关酶突变体的重要酶特征与人类和小鼠 ALOX15B 的酶特征进行了比较。在这里,我们观察到原生动物的 ALOX15B 异构体表现出与人类同源物相同的反应特异性。对三联决定簇的突变并没有改变原生动物酶的反应特异性,但对日坂决定簇的修饰却使其催化特性变弱。这些数据表明,原肠动物表现出活跃的类二十碳烷烃代谢。它们表达功能性 ALOX15B 同源物,但缺乏 ALOX15 基因。这些观察结果以及之前发现的 ALOX15 同源物很少出现在鱼类和鸟类等非哺乳类脊椎动物中的结论表明,ALOX15 同源物是在原生动物-气象动物转变过程中通过 ALOX15B 基因复制和随后的酶进化分化引入的。
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来源期刊
CiteScore
11.00
自引率
2.10%
发文量
109
审稿时长
53 days
期刊介绍: BBA Molecular and Cell Biology of Lipids publishes papers on original research dealing with novel aspects of molecular genetics related to the lipidome, the biosynthesis of lipids, the role of lipids in cells and whole organisms, the regulation of lipid metabolism and function, and lipidomics in all organisms. Manuscripts should significantly advance the understanding of the molecular mechanisms underlying biological processes in which lipids are involved. Papers detailing novel methodology must report significant biochemical, molecular, or functional insight in the area of lipids.
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